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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106355877   transcription initiation factor TFIID subunit 8-like 
 ath-u.5   AT3G02160   Bromodomain transcription factor 
 ath-u.5   TAF8   TBP-associated factor 8 
 ath-u.5   AT5G15570   Bromodomain transcription factor 
 gma-u.5   100810245   transcription initiation factor TFIID subunit 8 
 gma-u.5   100815889   transcription initiation factor TFIID subunit 8 
 gma-u.5   100778098   transcription initiation factor TFIID subunit 8 
 vvi-u.5   100260255   transcription initiation factor TFIID subunit 8 
 vvi-u.5   100246447   transcription initiation factor TFIID subunit 8 
 ppo-u.5   7480583   transcription initiation factor TFIID subunit 8 
 ppo-u.5   7484577   transcription initiation factor TFIID subunit 8 
 ppo-u.5   18100163   transcription initiation factor TFIID subunit 8 
 mtr-u.5   25497546   transcription initiation factor TFIID subunit 8 
 mtr-u.5   25485118   transcription initiation factor TFIID subunit 8 
 sly-u.5   101264247   transcription initiation factor TFIID subunit 8 
 osa-u.5   4333405   transcription initiation factor TFIID subunit 8 
 zma-u.5   103650604   transcription initiation factor TFIID subunit 8 
 zma-u.5   109944834   transcription initiation factor TFIID subunit 8 

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Top 50 coexpressed genes to 106355877 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106355877 (bna-r.1 coexpression data)

CoexMap"106355877"


bnaLOC106355877 | Entrez gene ID : 106355877    
Species bna ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae ghi
Paralog 1 3 3 2 3 2 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03022 [list] [network] Basal transcription factors (161 genes)
GO BP
GO CC
GO:0005669 [list] [network] transcription factor TFIID complex  (56 genes)  IEA  
GO MF
GO:0046982 [list] [network] protein heterodimerization activity  (268 genes)  IEA  
Protein XP_013651223.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto_nucl 4,  cysk 2,  chlo 1  (predict for XP_013651223.2)
Subcellular
localization
TargetP
other 8  (predict for XP_013651223.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106355877

.
ath-u.5
for
AT3G02160

.
ath-u.5
for
TAF8

.
ath-u.5
for
AT5G15570

.
gma-u.5
for
100810245

.
gma-u.5
for
100815889

.
gma-u.5
for
100778098

.
vvi-u.5
for
100260255

.
vvi-u.5
for
100246447

.
ppo-u.5
for
7480583

.
ppo-u.5
for
7484577

.
ppo-u.5
for
18100163

.
mtr-u.5
for
25497546

.
mtr-u.5
for
25485118

.
sly-u.5
for
101264247

.
osa-u.5
for
4333405

.
zma-u.5
for
103650604

.
zma-u.5
for
109944834

.


Ortholog ID: 2641
Species ath ath gma gma sly osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sot cit cit bdi nta nta
Symbol AT3G02160 TAF8 LOC100810245 LOC100815889 LOC101264247 LOC4333405 LOC109944834 LOC103650604 LOC103846400 LOC103858944 LOC100260255 LOC100246447 LOC7480583 LOC7486490 LOC25485118 LOC25497546 LOC123110669 LOC123167269 LOC123398503 LOC123407998 LOC107934328 LOC107888531 LOC106401287 LOC106438920 CHLRE_06g297550v5 LOC8084207 LOC102603303 LOC102630337 LOC102611692 LOC100844124 LOC107814805 LOC107791286
Function* Bromodomain transcription factor TBP-associated factor 8 transcription initiation factor TFIID subunit 8 transcription initiation factor TFIID subunit 8 transcription initiation factor TFIID subunit 8 transcription initiation factor TFIID subunit 8 transcription initiation factor TFIID subunit 8 transcription initiation factor TFIID subunit 8 transcription initiation factor TFIID subunit 8 uncharacterized LOC103858944 transcription initiation factor TFIID subunit 8 transcription initiation factor TFIID subunit 8 transcription initiation factor TFIID subunit 8 transcription initiation factor TFIID subunit 8 transcription initiation factor TFIID subunit 8 transcription initiation factor TFIID subunit 8 transcription initiation factor TFIID subunit 8 transcription initiation factor TFIID subunit 8 transcription initiation factor TFIID subunit 8-like transcription initiation factor TFIID subunit 8-like transcription initiation factor TFIID subunit 8 transcription initiation factor TFIID subunit 8 transcription initiation factor TFIID subunit 8 uncharacterized LOC106438920 uncharacterized protein transcription initiation factor TFIID subunit 8 transcription initiation factor TFIID subunit 8 transcription initiation factor TFIID subunit 8 transcription initiation factor TFIID subunit 8 transcription initiation factor TFIID subunit 8 transcription initiation factor TFIID subunit 8-like transcription initiation factor TFIID subunit 8-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03022 Basal transcription factors 2
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01240 Biosynthesis of cofactors 4
gma00562 Inositol phosphate metabolism 2
gma04070 Phosphatidylinositol signaling system 2
gma03022 Basal transcription factors 2
gma00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03022 Basal transcription factors 2
zma04141 Protein processing in endoplasmic reticulum 2
zma03015 mRNA surveillance pathway 2
zma03250 Viral life cycle - HIV-1 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 4
zma03250 Viral life cycle - HIV-1 3
zma03022 Basal transcription factors 2
zma03015 mRNA surveillance pathway 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00510 N-Glycan biosynthesis 2
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae03083 Polycomb repressive complex 3
tae04712 Circadian rhythm - plant 3
tae00540 Lipopolysaccharide biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna02010 ABC transporters 2
bna00240 Pyrimidine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 3
cre03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 2
sbi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 3
nta03022 Basal transcription factors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821295 829584 100810245 100815889 101264247 4333405 109944834 103650604 103846400 103858944 100260255 100246447 7480583 7486490 25485118 25497546 123110669 123167269 123398503 123407998 107934328 107888531 106401287 106438920 5717035 8084207 102603303 102630337 102611692 100844124 107814805 107791286
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