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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106372610   60S ribosomal protein L4-2-like 
 bna-r.1   111215776   60S ribosomal protein L4-1-like 
 bna-r.1   125580385   60S ribosomal protein L4-1 
 bna-r.1   125579115   60S ribosomal protein L4-1-like 
 bra-r.6   103870529   60S ribosomal protein L4-1 
 bra-r.6   103859287   60S ribosomal protein L4-1 
 ath-u.5   AT3G09630   Ribosomal protein L4/L1 family 
 ath-u.5   AT5G02870   Ribosomal protein L4/L1 family 
 ghi-r.1   107918079   60S ribosomal protein L4 
 ghi-r.1   107948336   60S ribosomal protein L4 
 ghi-r.1   107957964   60S ribosomal protein L4 
 cit-r.1   102619515   60S ribosomal protein L4-like 
 cit-r.1   102620368   60S ribosomal protein L4 
 gma-u.5   100779764   60S ribosomal protein L4 
 gma-u.5   100796712   60S ribosomal protein L4 
 gma-u.5   100819636   60S ribosomal protein L4 
 vvi-u.5   100257994   large ribosomal subunit protein uL4-like 
 vvi-u.5   100255110   large ribosomal subunit protein uL4 
 vvi-u.5   100251826   large ribosomal subunit protein uL4 
 ppo-u.5   18100240   60S ribosomal protein L4 
 ppo-u.5   7465290   60S ribosomal protein L4 
 ppo-u.5   18100242   60S ribosomal protein L4 
 mtr-u.5   11406297   60S ribosomal protein L4 
 mtr-u.5   11425489   60S ribosomal protein L4 
 mtr-u.5   25484054   60S ribosomal protein L4 
 sly-u.5   101259570   large ribosomal subunit protein uL4 
 sly-u.5   101253039   large ribosomal subunit protein uL4z 
 sly-u.5   101253641   large ribosomal subunit protein uL4z 
 sot-r.1   102577718   uncharacterized LOC102577718 
 sot-r.1   102590167   60S ribosomal protein L4-1-like 
 sot-r.1   102604998   60S ribosomal protein L4-1-like 
 nta-r.1   107779688   large ribosomal subunit protein uL4z 
 nta-r.1   107795127   large ribosomal subunit protein uL4z-like 
 nta-r.1   107812501   large ribosomal subunit protein uL4-like 
 osa-u.5   4342563   large ribosomal subunit protein uL4z 
 osa-u.5   9272589   large ribosomal subunit protein uL4 
 zma-u.5   100191607   60S ribosomal protein L4-like 
 zma-u.5   100191314   60S ribosomal protein L4-like 
 zma-u.5   100382075   60S ribosomal protein L4-like 
 tae-r.2   123064547   60S ribosomal protein L4-1 
 tae-r.2   123182079   60S ribosomal protein L4-1 
 tae-r.2   123133840   60S ribosomal protein L4-1 
 hvu-r.1   123449583   60S ribosomal protein L4-1-like 
 hvu-r.1   123452705   60S ribosomal protein L4-1-like 
 sbi-r.1   110432557   60S ribosomal protein L4-1-like 
 sbi-r.1   8081259   60S ribosomal protein L4-1 
 bdi-r.1   100845116   60S ribosomal protein L4-1 
 cre-r.1   CHLRE_09g397697v5   ribosomal protein L4 

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Top 50 coexpressed genes to 106372610 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106372610 (bna-r.1 coexpression data)

CoexMap"106372610"


bnaLOC106372610 | Entrez gene ID : 106372610    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 2 3 2 3 3 3 3 3 3 3 2 3 3 2 2 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03010 [list] [network] Ribosome (7497 genes)
GO BP
GO:0006412 [list] [network] translation  (1842 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (492 genes)  IEA  
GO:0005840 [list] [network] ribosome  (1367 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (1340 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (3852 genes)  IEA  
Protein XP_048624353.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 4,  cyto_nucl 3,  mito 1,  golg 1  (predict for XP_048624353.1)
Subcellular
localization
TargetP
other 5  (predict for XP_048624353.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106372610
bna-r.1
for
111215776
bna-r.1
for
125580385
bna-r.1
for
125579115
bra-r.6
for
103870529
bra-r.6
for
103859287
ath-u.5
for
AT3G09630
ath-u.5
for
AT5G02870
ghi-r.1
for
107918079
ghi-r.1
for
107948336
ghi-r.1
for
107957964
cit-r.1
for
102619515
cit-r.1
for
102620368
gma-u.5
for
100779764
gma-u.5
for
100796712
gma-u.5
for
100819636
vvi-u.5
for
100257994
vvi-u.5
for
100255110
vvi-u.5
for
100251826
ppo-u.5
for
18100240
ppo-u.5
for
7465290
ppo-u.5
for
18100242
mtr-u.5
for
11406297
mtr-u.5
for
11425489
mtr-u.5
for
25484054
sly-u.5
for
101259570
sly-u.5
for
101253039
sly-u.5
for
101253641
sot-r.1
for
102577718
sot-r.1
for
102590167
sot-r.1
for
102604998
nta-r.1
for
107779688
nta-r.1
for
107795127
nta-r.1
for
107812501
osa-u.5
for
4342563
osa-u.5
for
9272589
zma-u.5
for
100191607
zma-u.5
for
100191314
zma-u.5
for
100382075
tae-r.2
for
123064547
tae-r.2
for
123182079
tae-r.2
for
123133840
hvu-r.1
for
123449583
hvu-r.1
for
123452705
sbi-r.1
for
110432557
sbi-r.1
for
8081259
bdi-r.1
for
100845116
cre-r.1
for
CHLRE_09g397697v5


Ortholog ID: 1801
Species bna bna bna bra bra ath ath ghi ghi ghi cit cit gma gma gma vvi vvi vvi ppo ppo ppo mtr mtr mtr sly sly sly sot sot sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi cre
Symbol LOC106372610 LOC106452757 LOC106448658 LOC103870529 LOC103859287 AT3G09630 AT5G02870 LOC107948336 LOC107898498 LOC121223576 LOC102619515 LOC102620368 LOC100796712 LOC100819636 LOC100786828 LOC100257994 LOC100255110 LOC100251826 LOC18100240 LOC7465290 LOC18100242 LOC11406297 LOC11425489 LOC25484054 LOC101259570 LOC101253039 LOC101253641 LOC102577718 LOC102590167 LOC102604998 LOC107779688 LOC107812501 LOC107759872 LOC4342563 LOC9272589 LOC100191607 LOC100191314 LOC100280657 LOC123133840 LOC123105403 LOC123113676 LOC123449583 LOC123452705 LOC110432557 LOC8081259 LOC100845116 CHLRE_09g397697v5
Function* 60S ribosomal protein L4-2-like 60S ribosomal protein L4-1 60S ribosomal protein L4-1-like 60S ribosomal protein L4-1 60S ribosomal protein L4-1 Ribosomal protein L4/L1 family Ribosomal protein L4/L1 family 60S ribosomal protein L4 60S ribosomal protein L4 60S ribosomal protein L4 60S ribosomal protein L4-like 60S ribosomal protein L4 60S ribosomal protein L4 60S ribosomal protein L4 60S ribosomal protein L4 large ribosomal subunit protein uL4-like large ribosomal subunit protein uL4 large ribosomal subunit protein uL4 60S ribosomal protein L4 60S ribosomal protein L4 60S ribosomal protein L4 60S ribosomal protein L4 60S ribosomal protein L4 60S ribosomal protein L4 large ribosomal subunit protein uL4 large ribosomal subunit protein uL4z large ribosomal subunit protein uL4z uncharacterized LOC102577718 60S ribosomal protein L4-1-like 60S ribosomal protein L4-1-like large ribosomal subunit protein uL4z large ribosomal subunit protein uL4-like large ribosomal subunit protein uL4 large ribosomal subunit protein uL4z large ribosomal subunit protein uL4 60S ribosomal protein L4-like 60S ribosomal protein L4-like 60S ribosomal protein L4-like 60S ribosomal protein L4-1 60S ribosomal protein L4-1 60S ribosomal protein L4-1 60S ribosomal protein L4-1-like 60S ribosomal protein L4-1-like 60S ribosomal protein L4-1-like 60S ribosomal protein L4-1 60S ribosomal protein L4-1 ribosomal protein L4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 8
bra03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 11
ghi00300 Lysine biosynthesis 2
ghi00470 D-Amino acid metabolism 2
ghi01230 Biosynthesis of amino acids 2
ghi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 12
ghi00300 Lysine biosynthesis 2
ghi00470 D-Amino acid metabolism 2
ghi01230 Biosynthesis of amino acids 2
ghi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 15
ghi00300 Lysine biosynthesis 2
ghi00470 D-Amino acid metabolism 2
ghi01230 Biosynthesis of amino acids 2
ghi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 5
cit01230 Biosynthesis of amino acids 4
cit00670 One carbon pool by folate 3
cit00290 Valine, leucine and isoleucine biosynthesis 2
cit00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 7
cit01230 Biosynthesis of amino acids 5
cit01210 2-Oxocarboxylic acid metabolism 3
cit00270 Cysteine and methionine metabolism 3
cit00670 One carbon pool by folate 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 7
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 7
gma03015 mRNA surveillance pathway 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00920 Sulfur metabolism 3
vvi01320 Sulfur cycle 3
vvi00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 11
vvi04120 Ubiquitin mediated proteolysis 2
vvi03040 Spliceosome 2
vvi00230 Purine metabolism 2
vvi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
ppo01230 Biosynthesis of amino acids 3
ppo00270 Cysteine and methionine metabolism 2
ppo00260 Glycine, serine and threonine metabolism 2
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
ppo00270 Cysteine and methionine metabolism 2
ppo00260 Glycine, serine and threonine metabolism 2
ppo01230 Biosynthesis of amino acids 2
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 12
mtr00240 Pyrimidine metabolism 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 13
sly00261 Monobactam biosynthesis 2
sly00300 Lysine biosynthesis 2
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 14
sot00261 Monobactam biosynthesis 2
sot00300 Lysine biosynthesis 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 12
sot00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 11
zma00270 Cysteine and methionine metabolism 3
zma00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 11
tae00290 Valine, leucine and isoleucine biosynthesis 3
tae00770 Pantothenate and CoA biosynthesis 3
tae01210 2-Oxocarboxylic acid metabolism 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 8
tae01230 Biosynthesis of amino acids 4
tae00290 Valine, leucine and isoleucine biosynthesis 3
tae00770 Pantothenate and CoA biosynthesis 3
tae01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 12
tae00290 Valine, leucine and isoleucine biosynthesis 2
tae00770 Pantothenate and CoA biosynthesis 2
tae01210 2-Oxocarboxylic acid metabolism 2
tae01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 18
sbi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 8
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 14
cre01230 Biosynthesis of amino acids 3
cre03013 Nucleocytoplasmic transport 2
cre00220 Arginine biosynthesis 2
cre00250 Alanine, aspartate and glutamate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106372610 106452757 106448658 103870529 103859287 820120 831756 107948336 107898498 121223576 102619515 102620368 100796712 100819636 100786828 100257994 100255110 100251826 18100240 7465290 18100242 11406297 11425489 25484054 101259570 101253039 101253641 102577718 102590167 102604998 107779688 107812501 107759872 4342563 9272589 100191607 100191314 100280657 123133840 123105403 123113676 123449583 123452705 110432557 8081259 100845116 5720364
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