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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106374829   photosystem I reaction center subunit VI-1, chloroplastic-like 
 bna-r.1   125580921   photosystem I reaction center subunit VI-1, chloroplastic-like 
 bna-r.1   106452229   photosystem I reaction center subunit VI-1, chloroplastic 
 bna-r.1   106428610   photosystem I reaction center subunit VI, chloroplastic-like 
 bra-r.6   103832805   photosystem I reaction center subunit VI, chloroplastic-like 
 bra-r.6   103840210   photosystem I reaction center subunit VI-1, chloroplastic 
 bra-r.6   103871224   photosystem I reaction center subunit VI, chloroplastic-like 
 ath-u.5   PSAH-1   photosystem I subunit H-1 
 ath-u.5   PSAH2   photosystem I subunit H2 
 ghi-r.1   107906526   photosystem I reaction center subunit VI, chloroplastic 
 ghi-r.1   107941093   photosystem I reaction center subunit VI, chloroplastic 
 cit-r.1   102616527   photosystem I reaction center subunit VI-2, chloroplastic 
 gma-u.5   100500540   uncharacterized LOC100500540 
 gma-u.5   100811201   photosystem I reaction center subunit VI-2, chloroplastic-like 
 vvi-u.5   100241224   photosystem I reaction center subunit VI, chloroplastic 
 ppo-u.5   7478401   photosystem I reaction center subunit VI, chloroplastic 
 mtr-u.5   11442004   photosystem I reaction center subunit VI, chloroplastic 
 sly-u.5   101264609   photosystem I reaction center subunit VI-1, chloroplastic 
 sly-u.5   101248983   photosystem I reaction center subunit VI-1, chloroplastic-like 
 sly-u.5   101244751   photosystem I reaction center subunit VI, chloroplastic-like 
 sot-r.1   102592282   photosystem I reaction center subunit VI-2, chloroplastic-like 
 sot-r.1   102590963   photosystem I reaction center subunit VI, chloroplastic 
 sot-r.1   102578347   photosystem I reaction center subunit VI-2, chloroplastic 
 nta-r.1   107821676   photosystem I reaction center subunit VI-1, chloroplastic 
 nta-r.1   107820834   photosystem I reaction center subunit VI-2, chloroplastic-like 
 nta-r.1   107815353   photosystem I reaction center subunit VI-1, chloroplastic 
 osa-u.5   4339593   photosystem I reaction center subunit VI, chloroplastic-like 
 zma-u.5   541685   photosystem I H subunit 1 
 tae-r.2   123067985   photosystem I reaction center subunit VI, chloroplastic 
 tae-r.2   123145507   photosystem I reaction center subunit VI, chloroplastic 
 tae-r.2   123183068   photosystem I reaction center subunit VI, chloroplastic 
 hvu-r.1   123450083   photosystem I reaction center subunit VI, chloroplastic 
 sbi-r.1   8063584   photosystem I reaction center subunit VI, chloroplastic 
 bdi-r.1   100826849   photosystem I reaction center subunit VI, chloroplastic 
 cre-r.1   CHLRE_07g330250v5   uncharacterized protein 

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Top 50 coexpressed genes to 106374829 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106374829 (bna-r.1 coexpression data)

CoexMap"106374829"


bnaLOC106374829 | Entrez gene ID : 106374829    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 2 2 1 2 1 1 1 3 3 3 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna00195 [list] [network] Photosynthesis (310 genes)
GO BP
GO:0015979 [list] [network] photosynthesis  (408 genes)  IEA  
GO CC
GO:0009538 [list] [network] photosystem I reaction center  (24 genes)  IEA  
GO:0009522 [list] [network] photosystem I  (65 genes)  IEA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (359 genes)  IEA  
GO MF
Protein XP_013670223.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_013670223.1)
Subcellular
localization
TargetP
scret 4,  chlo 4  (predict for XP_013670223.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106374829
bna-r.1
for
125580921
bna-r.1
for
106452229
bna-r.1
for
106428610
bra-r.6
for
103832805
bra-r.6
for
103840210
bra-r.6
for
103871224
ath-u.5
for
PSAH-1
ath-u.5
for
PSAH2
ghi-r.1
for
107906526
ghi-r.1
for
107941093
cit-r.1
for
102616527
gma-u.5
for
100500540
gma-u.5
for
100811201
vvi-u.5
for
100241224
ppo-u.5
for
7478401
mtr-u.5
for
11442004
sly-u.5
for
101264609
sly-u.5
for
101248983
sly-u.5
for
101244751
sot-r.1
for
102592282
sot-r.1
for
102590963
sot-r.1
for
102578347
nta-r.1
for
107821676
nta-r.1
for
107820834
nta-r.1
for
107815353
osa-u.5
for
4339593
zma-u.5
for
541685
tae-r.2
for
123067985
tae-r.2
for
123145507
tae-r.2
for
123183068
hvu-r.1
for
123450083
sbi-r.1
for
8063584
bdi-r.1
for
100826849
cre-r.1
for
CHLRE_07g330250v5


Ortholog ID: 3804
Species bna bna bna bra bra bra ath ath ghi ghi cit gma gma gma vvi ppo mtr sly sly sly sot sot sot nta nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC125580921 LOC106452229 LOC106345743 LOC103832805 LOC103840210 LOC103869852 PSAH-1 PSAH2 LOC107906526 LOC107941093 LOC102616527 LOC100500540 LOC100776789 LOC100499832 LOC100241224 LOC7478401 LOC11442004 LOC101264609 LOC101248983 LOC101244751 LOC102592282 LOC102590963 LOC102578347 LOC107821676 LOC107820834 LOC107783578 LOC4339593 LOC541685 LOC123067985 LOC123145507 LOC123183068 LOC123450083 LOC8063584 LOC100826849 CHLRE_07g330250v5
Function* photosystem I reaction center subunit VI-1, chloroplastic-like photosystem I reaction center subunit VI-1, chloroplastic photosystem I reaction center subunit VI, chloroplastic photosystem I reaction center subunit VI, chloroplastic-like photosystem I reaction center subunit VI-1, chloroplastic photosystem I reaction center subunit VI-1, chloroplastic photosystem I subunit H-1 photosystem I subunit H2 photosystem I reaction center subunit VI, chloroplastic photosystem I reaction center subunit VI, chloroplastic photosystem I reaction center subunit VI-2, chloroplastic uncharacterized LOC100500540 photosystem I reaction center subunit VI, chloroplastic-like uncharacterized LOC100499832 photosystem I reaction center subunit VI, chloroplastic photosystem I reaction center subunit VI, chloroplastic photosystem I reaction center subunit VI, chloroplastic photosystem I reaction center subunit VI-1, chloroplastic photosystem I reaction center subunit VI-1, chloroplastic-like photosystem I reaction center subunit VI, chloroplastic-like photosystem I reaction center subunit VI-2, chloroplastic-like photosystem I reaction center subunit VI, chloroplastic photosystem I reaction center subunit VI-2, chloroplastic photosystem I reaction center subunit VI-1, chloroplastic photosystem I reaction center subunit VI-2, chloroplastic-like photosystem I reaction center subunit VI-1, chloroplastic photosystem I reaction center subunit VI, chloroplastic-like photosystem I H subunit 1 photosystem I reaction center subunit VI, chloroplastic photosystem I reaction center subunit VI, chloroplastic photosystem I reaction center subunit VI, chloroplastic photosystem I reaction center subunit VI, chloroplastic photosystem I reaction center subunit VI, chloroplastic photosystem I reaction center subunit VI, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 5
bra00630 Glyoxylate and dicarboxylate metabolism 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 14
bra00196 Photosynthesis - antenna proteins 2
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 14
ath00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 13
ath00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 10
ghi00906 Carotenoid biosynthesis 2
ghi00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 10
ghi00196 Photosynthesis - antenna proteins 3
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 11
cit00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00196 Photosynthesis - antenna proteins 9
gma00195 Photosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 12
gma00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 13
sly00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00196 Photosynthesis - antenna proteins 10
sly00195 Photosynthesis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 10
sly00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 12
sot00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 13
sot00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 17
sot00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 7
nta00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 8
nta00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 11
nta00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 14
tae00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 16
tae00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 13
tae00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 9
hvu00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00196 Photosynthesis - antenna proteins 11
sbi00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 11
bdi00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00196 Photosynthesis - antenna proteins 11
cre00195 Photosynthesis 8
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 125580921 106452229 106345743 103832805 103840210 103869852 820859 841653 107906526 107941093 102616527 100500540 100776789 100499832 100241224 7478401 11442004 101264609 101248983 101244751 102592282 102590963 102578347 107821676 107820834 107783578 4339593 541685 123067985 123145507 123183068 123450083 8063584 100826849 5716179
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