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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106375011   DNA-directed RNA polymerases II, IV and V subunit 12 
 ath-u.5   NRPB12   DNA directed RNA polymerase, 7 kDa subunit 
 gma-u.5   100790164   DNA-directed RNA polymerases II, IV and V subunit 12 
 gma-u.5   100500417   DNA-directed RNA polymerases II, IV and V subunit 12 
 ppo-u.5   7454993   DNA-directed RNA polymerases II, IV and V subunit 12 
 mtr-u.5   25498670   DNA-directed RNA polymerases II, IV and V subunit 12 
 osa-u.5   9272152   DNA-directed RNA polymerases II, IV and V subunit 12 
 osa-u.5   9269422   DNA-directed RNA polymerases II, IV and V subunit 12 
 zma-u.5   100284471   DNA-directed RNA polymerases I, II, and III 7.3 kDa polypeptide 
 zma-u.5   100285004   uncharacterized LOC100285004 

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Top 50 coexpressed genes to 106375011 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106375011 (bna-r.1 coexpression data)

CoexMap"106375011"


bnaLOC106375011 | Entrez gene ID : 106375011    
Species bna ath gma ppo mtr osa zma hvu vvi sly cit bra ghi sbi bdi nta tae cre sot
Paralog 1 1 2 1 1 2 2 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03020 [list] [network] RNA polymerase (161 genes)
bna03420 [list] [network] Nucleotide excision repair (233 genes)
GO BP
GO:0006351 [list] [network] DNA-templated transcription  (740 genes)  IEA  
GO CC
GO:0005736 [list] [network] RNA polymerase I complex  (52 genes)  IEA  
GO:0005666 [list] [network] RNA polymerase III complex  (74 genes)  IEA  
GO:0005665 [list] [network] RNA polymerase II, core complex  (76 genes)  IEA  
GO MF
GO:0003899 [list] [network] DNA-directed RNA polymerase activity  (117 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (3493 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (6522 genes)  IEA  
Protein XP_022554112.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  extr 3,  chlo_mito 3  (predict for XP_022554112.1)
Subcellular
localization
TargetP
other 8  (predict for XP_022554112.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106375011
ath-u.5
for
NRPB12
gma-u.5
for
100790164
gma-u.5
for
100500417
ppo-u.5
for
7454993
mtr-u.5
for
25498670
osa-u.5
for
9272152
osa-u.5
for
9269422
zma-u.5
for
100284471
zma-u.5
for
100285004


Ortholog ID: 5383
Species bna bna bra ath ghi ghi cit gma gma ppo mtr osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC106375011 LOC106359440 LOC103832655 NRPB12 LOC121218671 LOC107904697 LOC102608086 LOC100790164 LOC100500417 LOC7454993 LOC25498670 LOC9272152 LOC9269422 LOC100284471 LOC100285004 LOC123053337 LOC123045490 LOC123440254 LOC123426753 LOC8085014 LOC8057959 LOC100828953 LOC100844690 CHLRE_07g342352v5
Function* DNA-directed RNA polymerases II, IV and V subunit 12 DNA-directed RNA polymerases II, IV and V subunit 12 DNA-directed RNA polymerases II, IV and V subunit 12 DNA directed RNA polymerase, 7 kDa subunit DNA-directed RNA polymerases II, IV and V subunit 12 DNA-directed RNA polymerases II, IV and V subunit 12 DNA-directed RNA polymerases II, IV and V subunit 12 DNA-directed RNA polymerases II, IV and V subunit 12 DNA-directed RNA polymerases II, IV and V subunit 12 DNA-directed RNA polymerases II, IV and V subunit 12 DNA-directed RNA polymerases II, IV and V subunit 12 DNA-directed RNA polymerases II, IV and V subunit 12 DNA-directed RNA polymerases II, IV and V subunit 12 DNA-directed RNA polymerases I, II, and III 7.3 kDa polypeptide uncharacterized LOC100285004 DNA-directed RNA polymerases II, IV and V subunit 12 DNA-directed RNA polymerases II, IV and V subunit 12 DNA-directed RNA polymerases II, IV and V subunit 12 DNA-directed RNA polymerases II, IV and V subunit 12 DNA-directed RNA polymerases II, IV and V subunit 12 DNA-directed RNA polymerases II, IV and V subunit 12 DNA-directed RNA polymerases II, IV and V subunit 12 DNA-directed RNA polymerases II, IV and V subunit 12 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 4
bna03420 Nucleotide excision repair 4
bna00510 N-Glycan biosynthesis 2
bna00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 4
bna03420 Nucleotide excision repair 4
bna00510 N-Glycan biosynthesis 2
bna00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 4
bra03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 6
ath03018 RNA degradation 2
ath03020 RNA polymerase 2
ath03420 Nucleotide excision repair 2
ath03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 4
ghi03420 Nucleotide excision repair 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 4
ghi03420 Nucleotide excision repair 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 13
cit00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 11
gma03020 RNA polymerase 2
gma03420 Nucleotide excision repair 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
gma03010 Ribosome 3
gma03020 RNA polymerase 2
gma03420 Nucleotide excision repair 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03020 RNA polymerase 2
ppo03420 Nucleotide excision repair 2
ppo00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 14
osa03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
osa03010 Ribosome 2
osa03020 RNA polymerase 2
osa03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
zma03015 mRNA surveillance pathway 2
zma03020 RNA polymerase 2
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 6
tae03420 Nucleotide excision repair 6
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
hvu03020 RNA polymerase 3
hvu03420 Nucleotide excision repair 3
hvu00230 Purine metabolism 2
hvu01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03020 RNA polymerase 3
hvu03420 Nucleotide excision repair 3
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 5
sbi03010 Ribosome 4
sbi03420 Nucleotide excision repair 4
sbi03020 RNA polymerase 3
sbi04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi03050 Proteasome 2
sbi04120 Ubiquitin mediated proteolysis 2
sbi03020 RNA polymerase 2
sbi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03020 RNA polymerase 2
bdi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03020 RNA polymerase 7
cre03008 Ribosome biogenesis in eukaryotes 4
cre03420 Nucleotide excision repair 4
cre03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106375011 106359440 103832655 834103 121218671 107904697 102608086 100790164 100500417 7454993 25498670 9272152 9269422 100284471 100285004 123053337 123045490 123440254 123426753 8085014 8057959 100828953 100844690 5717990
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