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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106375296   probable ribosome-binding factor A, chloroplastic 
 bna-r.1   106428779   probable ribosome-binding factor A, chloroplastic 
 bna-r.1   106352754   probable ribosome-binding factor A, chloroplastic 
 bna-r.1   111207806   probable ribosome-binding factor A, chloroplastic 
 bra-r.6   103862372   probable ribosome-binding factor A, chloroplastic 
 bra-r.6   103834996   probable ribosome-binding factor A, chloroplastic 
 ath-u.5   AT4G34730   ribosome-binding factor A family protein 
 ghi-r.1   107903713   probable ribosome-binding factor A, chloroplastic 
 ghi-r.1   107920539   probable ribosome-binding factor A, chloroplastic 
 cit-r.1   102627982   probable ribosome-binding factor A, chloroplastic 
 gma-u.5   100812407   probable ribosome-binding factor A, chloroplastic 
 vvi-u.5   100267621   probable ribosome-binding factor A, chloroplastic 
 ppo-u.5   7477847   probable ribosome-binding factor A, chloroplastic 
 mtr-u.5   11428164   probable ribosome-binding factor A, chloroplastic 
 sly-u.5   101268810   probable ribosome-binding factor A, chloroplastic 
 sot-r.1   102599539   probable ribosome-binding factor A, chloroplastic 
 nta-r.1   107782153   putative ribosome-binding factor A, chloroplastic 
 nta-r.1   107766361   putative ribosome-binding factor A, chloroplastic 
 osa-u.5   4340049   probable ribosome-binding factor A, chloroplastic 
 zma-u.5   100282982   uncharacterized LOC100282982 
 tae-r.2   123167991   probable ribosome-binding factor A, chloroplastic 
 tae-r.2   123150610   probable ribosome-binding factor A, chloroplastic 
 hvu-r.1   123411008   probable ribosome-binding factor A, chloroplastic 
 sbi-r.1   8068416   probable ribosome-binding factor A, chloroplastic 
 bdi-r.1   100833422   probable ribosome-binding factor A, chloroplastic 
 cre-r.1   CHLRE_02g145000v5   uncharacterized protein 

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Top 50 coexpressed genes to 106375296 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106375296 (bna-r.1 coexpression data)

CoexMap"106375296"


bnaLOC106375296 | Entrez gene ID : 106375296    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 1 2 1 1 1 1 1 1 1 2 1 1 2 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006364 [list] [network] rRNA processing  (647 genes)  IEA  
GO:0042254 [list] [network] ribosome biogenesis  (963 genes)  IEA  
GO CC
GO MF
GO:0043024 [list] [network] ribosomal small subunit binding  (35 genes)  IEA  
Protein XP_013670618.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  vacu 1  (predict for XP_013670618.2)
Subcellular
localization
TargetP
chlo 9  (predict for XP_013670618.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106375296
bna-r.1
for
106428779
bna-r.1
for
106352754
bna-r.1
for
111207806
bra-r.6
for
103862372
bra-r.6
for
103834996
ath-u.5
for
AT4G34730
ghi-r.1
for
107903713
ghi-r.1
for
107920539
cit-r.1
for
102627982
gma-u.5
for
100812407
vvi-u.5
for
100267621
ppo-u.5
for
7477847
mtr-u.5
for
11428164
sly-u.5
for
101268810
sot-r.1
for
102599539
nta-r.1
for
107782153
nta-r.1
for
107766361
osa-u.5
for
4340049
zma-u.5
for
100282982
tae-r.2
for
123167991
tae-r.2
for
123150610
hvu-r.1
for
123411008
sbi-r.1
for
8068416
bdi-r.1
for
100833422
cre-r.1
for
CHLRE_02g145000v5


Ortholog ID: 8111
Species bna bna bna bra bra ath ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC106428779 LOC106352754 LOC111207806 LOC103862372 LOC103834996 AT4G34730 LOC107903713 LOC107920539 LOC102627982 LOC100812407 LOC100267621 LOC7477847 LOC11428164 LOC101268810 LOC102599539 LOC107782153 LOC107766361 LOC4340049 LOC100282982 LOC123150610 LOC123087881 LOC123411008 LOC8068416 LOC100833422 CHLRE_02g145000v5
Function* probable ribosome-binding factor A, chloroplastic probable ribosome-binding factor A, chloroplastic probable ribosome-binding factor A, chloroplastic probable ribosome-binding factor A, chloroplastic probable ribosome-binding factor A, chloroplastic ribosome-binding factor A family protein probable ribosome-binding factor A, chloroplastic probable ribosome-binding factor A, chloroplastic probable ribosome-binding factor A, chloroplastic probable ribosome-binding factor A, chloroplastic probable ribosome-binding factor A, chloroplastic probable ribosome-binding factor A, chloroplastic probable ribosome-binding factor A, chloroplastic probable ribosome-binding factor A, chloroplastic probable ribosome-binding factor A, chloroplastic putative ribosome-binding factor A, chloroplastic putative ribosome-binding factor A, chloroplastic probable ribosome-binding factor A, chloroplastic uncharacterized LOC100282982 probable ribosome-binding factor A, chloroplastic probable ribosome-binding factor A, chloroplastic probable ribosome-binding factor A, chloroplastic probable ribosome-binding factor A, chloroplastic probable ribosome-binding factor A, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 5
ghi04146 Peroxisome 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 5
ghi04146 Peroxisome 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 12
sly00860 Porphyrin metabolism 2
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 6
sot00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 11
nta00860 Porphyrin metabolism 4
nta01240 Biosynthesis of cofactors 4
nta00061 Fatty acid biosynthesis 2
nta00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 15
nta00061 Fatty acid biosynthesis 2
nta00620 Pyruvate metabolism 2
nta00640 Propanoate metabolism 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106428779 106352754 111207806 103862372 103834996 829625 107903713 107920539 102627982 100812407 100267621 7477847 11428164 101268810 102599539 107782153 107766361 4340049 100282982 123150610 123087881 123411008 8068416 100833422 5720493
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