ATTED-II : GeneCoexpression result

Species	Gene	Description
bna-r.1	106375611	protein CHUP1, chloroplastic
ath-u.5	AT4G18570	Tetratricopeptide repeat (TPR)-like superfamily protein
gma-u.5	100814896	protein CHUP1, chloroplastic
gma-u.5	100799946	protein CHUP1, chloroplastic
gma-u.5	100784618	protein CHUP1, chloroplastic
vvi-u.5	100248051	protein CHUP1, chloroplastic
ppo-u.5	7470223	protein CHUP1, chloroplastic
ppo-u.5	7472316	protein CHUP1, chloroplastic
mtr-u.5	11444126	protein CHUP1, chloroplastic
sly-u.5	101248539	protein INCREASED PETAL GROWTH ANISOTROPY 1
osa-u.5	4339678	protein INCREASED PETAL GROWTH ANISOTROPY 1
osa-u.5	4325372	protein INCREASED PETAL GROWTH ANISOTROPY 1
zma-u.5	103630759	protein CHUP1, chloroplastic
zma-u.5	100273527	pherophorin like protein

Annotation

functional annotation

KEGG

GO BP

GO:0009658 [list] [network] chloroplast organization

(193 genes)

IEA

GO CC

GO:0009707 [list] [network] chloroplast outer membrane

(94 genes)

IEA

GO MF

Protein

XP_013671019.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 5, mito 3, nucl 1, cyto_mito 1, mito_plas 1

(predict for XP_013671019.1)

Subcellular
localization
TargetP

chlo 7

(predict for XP_013671019.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106375611	ath-u.5 for AT4G18570	gma-u.5 for 100814896	gma-u.5 for 100799946	gma-u.5 for 100784618	vvi-u.5 for 100248051	ppo-u.5 for 7470223	ppo-u.5 for 7472316	mtr-u.5 for 11444126	sly-u.5 for 101248539	osa-u.5 for 4339678	osa-u.5 for 4325372	zma-u.5 for 103630759	zma-u.5 for 100273527

Ortholog

Ortholog ID: 4105

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

protein CHUP1, chloroplastic-like

protein CHUP1, chloroplastic

Tetratricopeptide repeat (TPR)-like superfamily protein

protein CHUP1, chloroplastic

protein INCREASED PETAL GROWTH ANISOTROPY 1

protein CHUP1, chloroplastic

protein INCREASED PETAL GROWTH ANISOTROPY 1

protein INCREASED PETAL GROWTH ANISOTROPY 1-like

protein INCREASED PETAL GROWTH ANISOTROPY 1

pherophorin like protein

protein CHUP1, chloroplastic

protein CHUP1, chloroplastic-like

protein CHUP1, chloroplastic

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00905	Brassinosteroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04145	Phagosome	3
ppo04517	IgSF CAM signaling	3
ppo04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04145	Phagosome	4
sly04517	IgSF CAM signaling	4
sly04814	Motor proteins	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta02010	ABC transporters	2
nta04820	Cytoskeleton in muscle cells	2
nta00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta02010	ABC transporters	2
nta00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	2
zma00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00040	Pentose and glucuronate interconversions	2

Expression

Expression pattern

Entrez Gene ID^*

106425368

106411043

103861003

103834069

827588

107901727

107891769

102617906

100814896

100782144

100248051

7470223

7472316

11444126

101248539

102600315

107767840

107793322

4339678

4325372

100273527

103630759

123078676

123070236

123451220

8058250

8064706

100832861

100834196

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 106375611 (bna-r.1 coexpression data)

Top 50 enrichment test to 106375611 (bna-r.1 coexpression data)


Species	bna	ath	gma	vvi	ppo	mtr	sly	osa	zma	hvu	cit	bra	ghi	sbi	bdi	nta	tae	cre	sot
Paralog	1	1	3	1	2	1	1	2	2	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 106375611 (bna-r.1 coexpression data)

Top 50 enrichment test to 106375611 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**