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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106377350   pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic 
 ath-u.5   PDH-E1 ALPHA   pyruvate dehydrogenase E1 alpha 
 gma-u.5   100811207   pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic 
 gma-u.5   100802573   pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic 
 gma-u.5   100793091   pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic 
 vvi-u.5   100264423   pyruvate dehydrogenase E1 component subunit alpha-like 
 ppo-u.5   7478801   pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic 
 mtr-u.5   25500614   pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic 
 sly-u.5   101256654   pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic 
 sly-u.5   101256355   pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic 
 osa-u.5   4334968   pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic-like 
 zma-u.5   100272834   Pyruvate dehydrogenase E1 component subunit alpha-3 chloroplastic 

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Top 50 coexpressed genes to 106377350 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106377350 (bna-r.1 coexpression data)

CoexMap"106377350"


bnaLOC106377350 | Entrez gene ID : 106377350    
Species bna ath gma vvi ppo mtr sly osa zma bdi hvu bra cit sbi ghi sot nta cre tae
Paralog 1 1 3 1 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna00010 [list] [network] Glycolysis / Gluconeogenesis (386 genes)
bna00020 [list] [network] Citrate cycle (TCA cycle) (195 genes)
bna00620 [list] [network] Pyruvate metabolism (300 genes)
bna00785 [list] [network] Lipoic acid metabolism (104 genes)
bna01200 [list] [network] Carbon metabolism (888 genes)
bna01210 [list] [network] 2-Oxocarboxylic acid metabolism (324 genes)
GO BP
GO:0006086 [list] [network] pyruvate decarboxylation to acetyl-CoA  (39 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (18248 genes)  IEA  
GO MF
GO:0004739 [list] [network] pyruvate dehydrogenase (acetyl-transferring) activity  (23 genes)  IEA  
Protein XP_048621804.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_048621804.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_048621804.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106377350
ath-u.5
for
PDH-E1 ALPHA
gma-u.5
for
100811207
gma-u.5
for
100802573
gma-u.5
for
100793091
vvi-u.5
for
100264423
ppo-u.5
for
7478801
mtr-u.5
for
25500614
sly-u.5
for
101256654
sly-u.5
for
101256355
osa-u.5
for
4334968
zma-u.5
for
100272834


Ortholog ID: 6718
Species bna bna bra bra ath ghi ghi cit gma gma vvi ppo mtr sly sly sot sot nta nta osa zma tae hvu sbi bdi bdi cre
Symbol LOC125575234 LOC106370897 LOC103844622 LOC103843771 PDH-E1 ALPHA LOC107924236 LOC107912283 LOC102622026 LOC100793091 LOC100802573 LOC100264423 LOC7478801 LOC25500614 LOC101256355 LOC101256654 LOC102601242 LOC102606109 LOC107770390 LOC107797927 LOC4334968 LOC100272834 LOC123186940 LOC123431483 LOC8065978 LOC100837044 LOC100843225 CHLRE_02g099850v5
Function* pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic-like pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic pyruvate dehydrogenase E1 alpha pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic pyruvate dehydrogenase E1 component subunit alpha-like pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic-like pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic-like pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic-like pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic-like Pyruvate dehydrogenase E1 component subunit alpha-3 chloroplastic pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic uncharacterized LOC100837044 pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00010 Glycolysis / Gluconeogenesis 4
bna00020 Citrate cycle (TCA cycle) 4
bna00620 Pyruvate metabolism 4
bna00785 Lipoic acid metabolism 4
bna01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00010 Glycolysis / Gluconeogenesis 4
bna00020 Citrate cycle (TCA cycle) 4
bna00620 Pyruvate metabolism 4
bna00785 Lipoic acid metabolism 4
bna01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00620 Pyruvate metabolism 13
bra01200 Carbon metabolism 13
bra00010 Glycolysis / Gluconeogenesis 9
bra00061 Fatty acid biosynthesis 6
bra01212 Fatty acid metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00620 Pyruvate metabolism 9
bra01200 Carbon metabolism 9
bra00061 Fatty acid biosynthesis 8
bra00010 Glycolysis / Gluconeogenesis 7
bra01210 2-Oxocarboxylic acid metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00620 Pyruvate metabolism 12
ath01200 Carbon metabolism 12
ath00010 Glycolysis / Gluconeogenesis 8
ath00061 Fatty acid biosynthesis 7
ath01212 Fatty acid metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00620 Pyruvate metabolism 14
ghi01200 Carbon metabolism 14
ghi00010 Glycolysis / Gluconeogenesis 12
ghi00020 Citrate cycle (TCA cycle) 12
ghi00785 Lipoic acid metabolism 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00620 Pyruvate metabolism 14
ghi01200 Carbon metabolism 14
ghi00010 Glycolysis / Gluconeogenesis 12
ghi00020 Citrate cycle (TCA cycle) 12
ghi00785 Lipoic acid metabolism 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 8
cit00620 Pyruvate metabolism 7
cit00010 Glycolysis / Gluconeogenesis 6
cit00020 Citrate cycle (TCA cycle) 5
cit00785 Lipoic acid metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 10
gma00010 Glycolysis / Gluconeogenesis 8
gma00020 Citrate cycle (TCA cycle) 8
gma00620 Pyruvate metabolism 8
gma00785 Lipoic acid metabolism 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00010 Glycolysis / Gluconeogenesis 8
gma00020 Citrate cycle (TCA cycle) 8
gma00620 Pyruvate metabolism 8
gma00785 Lipoic acid metabolism 8
gma01200 Carbon metabolism 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 6
vvi01240 Biosynthesis of cofactors 5
vvi00010 Glycolysis / Gluconeogenesis 5
vvi00020 Citrate cycle (TCA cycle) 5
vvi00620 Pyruvate metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 8
ppo00620 Pyruvate metabolism 7
ppo01200 Carbon metabolism 7
ppo00010 Glycolysis / Gluconeogenesis 6
ppo00020 Citrate cycle (TCA cycle) 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00620 Pyruvate metabolism 7
mtr01200 Carbon metabolism 7
mtr00010 Glycolysis / Gluconeogenesis 6
mtr00785 Lipoic acid metabolism 6
mtr00061 Fatty acid biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00620 Pyruvate metabolism 9
sly01200 Carbon metabolism 9
sly00010 Glycolysis / Gluconeogenesis 7
sly00785 Lipoic acid metabolism 7
sly01210 2-Oxocarboxylic acid metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 11
sly00620 Pyruvate metabolism 10
sly00010 Glycolysis / Gluconeogenesis 9
sly00785 Lipoic acid metabolism 7
sly00020 Citrate cycle (TCA cycle) 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00620 Pyruvate metabolism 9
sot01200 Carbon metabolism 9
sot00061 Fatty acid biosynthesis 8
sot01212 Fatty acid metabolism 8
sot00010 Glycolysis / Gluconeogenesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00620 Pyruvate metabolism 9
sot01200 Carbon metabolism 9
sot00061 Fatty acid biosynthesis 7
sot01212 Fatty acid metabolism 7
sot01210 2-Oxocarboxylic acid metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00620 Pyruvate metabolism 9
nta01200 Carbon metabolism 9
nta00010 Glycolysis / Gluconeogenesis 7
nta00020 Citrate cycle (TCA cycle) 7
nta00785 Lipoic acid metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00620 Pyruvate metabolism 11
nta01200 Carbon metabolism 11
nta00010 Glycolysis / Gluconeogenesis 9
nta00020 Citrate cycle (TCA cycle) 9
nta00785 Lipoic acid metabolism 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00010 Glycolysis / Gluconeogenesis 7
osa00620 Pyruvate metabolism 7
osa01200 Carbon metabolism 7
osa00020 Citrate cycle (TCA cycle) 6
osa00785 Lipoic acid metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00061 Fatty acid biosynthesis 9
zma01212 Fatty acid metabolism 9
zma00620 Pyruvate metabolism 7
zma00010 Glycolysis / Gluconeogenesis 5
zma00020 Citrate cycle (TCA cycle) 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 6
tae00620 Pyruvate metabolism 6
tae01200 Carbon metabolism 6
tae00020 Citrate cycle (TCA cycle) 4
tae00785 Lipoic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 9
sbi00010 Glycolysis / Gluconeogenesis 6
sbi00020 Citrate cycle (TCA cycle) 6
sbi00620 Pyruvate metabolism 6
sbi00785 Lipoic acid metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00061 Fatty acid biosynthesis 7
bdi01212 Fatty acid metabolism 7
bdi01200 Carbon metabolism 6
bdi00620 Pyruvate metabolism 4
bdi01210 2-Oxocarboxylic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00061 Fatty acid biosynthesis 9
cre01212 Fatty acid metabolism 9
cre00620 Pyruvate metabolism 8
cre01200 Carbon metabolism 8
cre01240 Biosynthesis of cofactors 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 125575234 106370897 103844622 103843771 839429 107924236 107912283 102622026 100793091 100802573 100264423 7478801 25500614 101256355 101256654 102601242 102606109 107770390 107797927 4334968 100272834 123186940 123431483 8065978 100837044 100843225 66052411
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