ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bna-r.1	106377520	protein CWC15 homolog
bna-r.1	106372553	protein CWC15 homolog
bna-r.1	106452338	protein CWC15 homolog
bna-r.1	111202414	protein CWC15 homolog
bra-r.6	103849751	protein CWC15 homolog
bra-r.6	103870189	protein CWC15 homolog
ath-u.5	EMB2769	Cwf15 / Cwc15 cell cycle control family protein
ghi-r.1	107893513	protein CWC15 homolog A
ghi-r.1	107918266	protein CWC15 homolog A
cit-r.1	102616006	uncharacterized LOC102616006
gma-u.5	100790612	Cwf15 / Cwc15 cell cycle control family protein
gma-u.5	100806229	protein CWC15 homolog
vvi-u.5	100260003	uncharacterized LOC100260003
ppo-u.5	7485126	uncharacterized LOC7485126
mtr-u.5	11406364	protein CWC15 homolog
sly-u.5	101245968	uncharacterized LOC101245968
sly-u.5	101265967	uncharacterized LOC101265967
sot-r.1	102604500	protein CWC15 homolog
sot-r.1	102578553	protein CWC15 homolog
nta-r.1	107765024	uncharacterized LOC107765024
nta-r.1	107795791	uncharacterized LOC107795791
nta-r.1	107783476	uncharacterized LOC107783476
osa-u.5	4339866	uncharacterized LOC4339866
zma-u.5	100192769	uncharacterized LOC100192769
zma-u.5	100282711	uncharacterized LOC100282711
tae-r.2	123088504	protein CWC15 homolog
tae-r.2	123088506	protein CWC15 homolog B
tae-r.2	123104670	protein CWC15 homolog
hvu-r.1	123410515	protein CWC15 homolog
hvu-r.1	123451777	protein CWC15 homolog
sbi-r.1	8079498	protein CWC15 homolog
sbi-r.1	8067892	protein CWC15 homolog
bdi-r.1	100845619	protein CWC15 homolog
cre-r.1	CHLRE_24g755447v5	uncharacterized protein

Top 50 coexpressed genes to 106377520 (bna-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 106377520 (bna-r.1 coexpression data)

CoexMap"106377520"

[Cytoscape]

Annotation

functional annotation

KEGG

bna03040 [list] [network] Spliceosome (912 genes)

GO BP

GO:0045292 [list] [network] mRNA cis splicing, via spliceosome

(62 genes)

IEA

GO CC

GO:0071013 [list] [network] catalytic step 2 spliceosome

(222 genes)

IEA

GO MF

GO:0003723 [list] [network] RNA binding

(3852 genes)

IEA

Protein

XP_013673224.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 8, chlo 1, cyto 1, plas 1, cyto_plas 1

(predict for XP_013673224.1)

Subcellular
localization
TargetP

other 4, mito 4

(predict for XP_013673224.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106377520	bna-r.1 for 106372553	bna-r.1 for 106452338	bna-r.1 for 111202414	bra-r.6 for 103849751	bra-r.6 for 103870189	ath-u.5 for EMB2769	ghi-r.1 for 107893513	ghi-r.1 for 107918266	cit-r.1 for 102616006	gma-u.5 for 100790612	gma-u.5 for 100806229	vvi-u.5 for 100260003	ppo-u.5 for 7485126	mtr-u.5 for 11406364	sly-u.5 for 101245968	sly-u.5 for 101265967	sot-r.1 for 102604500	sot-r.1 for 102578553	nta-r.1 for 107765024	nta-r.1 for 107795791	nta-r.1 for 107783476	osa-u.5 for 4339866	zma-u.5 for 100192769	zma-u.5 for 100282711	tae-r.2 for 123088504	tae-r.2 for 123088506	tae-r.2 for 123104670	hvu-r.1 for 123410515	hvu-r.1 for 123451777	sbi-r.1 for 8079498	sbi-r.1 for 8067892	bdi-r.1 for 100845619	cre-r.1 for CHLRE_24g755447v5

Ortholog

Ortholog ID: 5298

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

EMB2769

Function^*

protein CWC15 homolog

Cwf15 / Cwc15 cell cycle control family protein

protein CWC15 homolog A

uncharacterized LOC102616006

Cwf15 / Cwc15 cell cycle control family protein

protein CWC15 homolog

uncharacterized LOC100260003

uncharacterized LOC7485126

protein CWC15 homolog

uncharacterized LOC101245968

uncharacterized LOC101265967

protein CWC15 homolog

uncharacterized LOC107765024

uncharacterized LOC107795791

uncharacterized LOC107783476

uncharacterized LOC4339866

uncharacterized LOC100192769

uncharacterized LOC100282711

protein CWC15 homolog

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03050	Proteasome	5
bra03040	Spliceosome	2
bra04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03050	Proteasome	5
bra04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	2
ath04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	2
ghi03083	Polycomb repressive complex	2
ghi04120	Ubiquitin mediated proteolysis	2
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03083	Polycomb repressive complex	4
ghi04120	Ubiquitin mediated proteolysis	4
ghi04141	Protein processing in endoplasmic reticulum	4
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	6
gma03040	Spliceosome	4
gma03050	Proteasome	3
gma04120	Ubiquitin mediated proteolysis	2
gma03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	4
gma03040	Spliceosome	3
gma04120	Ubiquitin mediated proteolysis	2
gma04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04144	Endocytosis	3
ppo04145	Phagosome	2
ppo04148	Efferocytosis	2
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	3
mtr04120	Ubiquitin mediated proteolysis	2
mtr04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	6
nta04144	Endocytosis	4
nta03013	Nucleocytoplasmic transport	2
nta03040	Spliceosome	2
nta03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	6
nta03040	Spliceosome	3
nta00510	N-Glycan biosynthesis	2
nta00513	Various types of N-glycan biosynthesis	2
nta03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	4
nta03040	Spliceosome	3
nta00510	N-Glycan biosynthesis	2
nta00513	Various types of N-glycan biosynthesis	2
nta03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	4
zma03013	Nucleocytoplasmic transport	3
zma04130	SNARE interactions in vesicular transport	3
zma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	5
tae03022	Basal transcription factors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	5
tae03022	Basal transcription factors	4
tae04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	5
tae03022	Basal transcription factors	3
tae04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	3
hvu00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	3
hvu00280	Valine, leucine and isoleucine degradation	2
hvu00650	Butanoate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	2
sbi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03020	RNA polymerase	2
bdi03420	Nucleotide excision repair	2
bdi03040	Spliceosome	2
bdi00190	Oxidative phosphorylation	2
bdi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03040	Spliceosome	11
cre03018	RNA degradation	2

Expression

Expression pattern

Entrez Gene ID^*

106377520

106452338

111202414

103849751

103870189

820510

107893513

107918266

102616006

100790612

100806229

100260003

7485126

11406364

101245968

101265967

102604500

102578553

107765024

107795791

107783476

4339866

100192769

100282711

123088504

123122453

123150909

123410515

123451777

8079498

8067892

100845619

5727818

The preparation time of this page was 0.1 [sec].


Species	bna	bra	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	1	2	1	2	1	1	1	2	2	3	1	2	3	2	2	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 106377520 (bna-r.1 coexpression data)

Top 50 enrichment test to 106377520 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**