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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106380534   lipoyl synthase, chloroplastic 
 ath-u.5   FTRA2   ferredoxin/thioredoxin reductase subunit A (variable subunit) 2 
 ath-u.5   FTRA1   ferredoxin/thioredoxin reductase subunit A (variable subunit) 1 
 gma-u.5   100799564   ferredoxin-thioredoxin reductase, variable chain 
 gma-u.5   100305930   uncharacterized LOC100305930 
 vvi-u.5   100257686   ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like 
 ppo-u.5   7468473   ferredoxin-thioredoxin reductase, variable chain, chloroplastic 
 ppo-u.5   7497763   ferredoxin-thioredoxin reductase, variable chain 
 mtr-u.5   25495085   ferredoxin-thioredoxin reductase, variable chain 
 sly-u.5   101251324   ferredoxin-thioredoxin reductase, variable chain 
 osa-u.5   4330096   ferredoxin-thioredoxin reductase, variable chain 
 osa-u.5   4336471   ferredoxin-thioredoxin reductase, variable chain 
 zma-u.5   100285570   ferredoxin-thioredoxin reductase, variable chain-like 
 zma-u.5   100193300   uncharacterized LOC100193300 
 zma-u.5   100191544   ferredoxin-thioredoxin reductase, variable chain, chloroplastic 

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Top 50 coexpressed genes to 106380534 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106380534 (bna-r.1 coexpression data)

CoexMap"106380534"


bnaLOC106380534 | Entrez gene ID : 106380534    
Species bna ath gma vvi ppo mtr sly osa zma hvu cit bra ghi sbi bdi nta tae cre sot
Paralog 1 2 2 1 2 1 1 2 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna00785 [list] [network] Lipoic acid metabolism (104 genes)
bna01240 [list] [network] Biosynthesis of cofactors (726 genes)
GO BP
GO:0009107 [list] [network] lipoate biosynthetic process  (6 genes)  IEA  
GO:0015979 [list] [network] photosynthesis  (408 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (1821 genes)  IEA  
GO:0005739 [list] [network] mitochondrion  (1831 genes)  IEA  
GO MF
GO:0016992 [list] [network] lipoate synthase activity  (6 genes)  IEA  
GO:0051539 [list] [network] 4 iron, 4 sulfur cluster binding  (99 genes)  IEA  
Protein XP_048625057.1 [sequence] [blastp]
XP_048625061.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1  (predict for XP_048625057.1)
chlo 9  (predict for XP_048625061.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_048625057.1)
chlo 9  (predict for XP_048625061.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106380534
ath-u.5
for
FTRA2
ath-u.5
for
FTRA1
gma-u.5
for
100799564
gma-u.5
for
100305930
vvi-u.5
for
100257686
ppo-u.5
for
7468473
ppo-u.5
for
7497763
mtr-u.5
for
25495085
sly-u.5
for
101251324
osa-u.5
for
4330096
osa-u.5
for
4336471
zma-u.5
for
100285570
zma-u.5
for
100193300
zma-u.5
for
100191544


Ortholog ID: 4121
Species bna bna bra bra ath ath ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa osa zma zma tae hvu hvu sbi sbi bdi bdi
Symbol LOC125597792 LOC106382704 LOC103854898 LOC103855784 FTRA2 FTRA1 LOC107940989 LOC107909001 LOC102610025 LOC100305930 LOC100799564 LOC100257686 LOC7497763 LOC7468473 LOC25495085 LOC101251324 LOC102583051 LOC107804760 LOC107825900 LOC4336471 LOC4330096 LOC100193300 LOC100191544 LOC123127824 LOC123401757 LOC123430565 LOC8066198 LOC8056035 LOC100826761 LOC100829876
Function* ferredoxin-thioredoxin reductase, variable chain-like ferredoxin-thioredoxin reductase, variable chain-like ferredoxin-thioredoxin reductase, variable chain lipoyl synthase, chloroplastic ferredoxin/thioredoxin reductase subunit A (variable subunit) 2 ferredoxin/thioredoxin reductase subunit A (variable subunit) 1 ferredoxin-thioredoxin reductase, variable chain ferredoxin-thioredoxin reductase, variable chain ferredoxin-thioredoxin reductase, variable chain uncharacterized LOC100305930 ferredoxin-thioredoxin reductase, variable chain ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like ferredoxin-thioredoxin reductase, variable chain ferredoxin-thioredoxin reductase, variable chain, chloroplastic ferredoxin-thioredoxin reductase, variable chain ferredoxin-thioredoxin reductase, variable chain ferredoxin-thioredoxin reductase, variable chain ferredoxin-thioredoxin reductase, variable chain-like ferredoxin-thioredoxin reductase, variable chain ferredoxin-thioredoxin reductase, variable chain ferredoxin-thioredoxin reductase, variable chain uncharacterized LOC100193300 ferredoxin-thioredoxin reductase, variable chain, chloroplastic ferredoxin-thioredoxin reductase, variable chain ferredoxin-thioredoxin reductase, variable chain-like ferredoxin-thioredoxin reductase, variable chain-like ferredoxin-thioredoxin reductase, variable chain ferredoxin-thioredoxin reductase, variable chain ferredoxin-thioredoxin reductase, variable chain ferredoxin-thioredoxin reductase, variable chain, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00100 Steroid biosynthesis 2
bna04142 Lysosome 2
bna04148 Efferocytosis 2
bna00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00100 Steroid biosynthesis 2
bna04142 Lysosome 2
bna04148 Efferocytosis 2
bna00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00051 Fructose and mannose metabolism 2
bra00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
ghi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 3
vvi00195 Photosynthesis 3
vvi00630 Glyoxylate and dicarboxylate metabolism 2
vvi00710 Carbon fixation by Calvin cycle 2
vvi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 6
ppo00630 Glyoxylate and dicarboxylate metabolism 5
ppo00260 Glycine, serine and threonine metabolism 3
ppo00710 Carbon fixation by Calvin cycle 3
ppo00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 8
sot00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 8
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 8
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00910 Nitrogen metabolism 2
osa01310 Nitrogen cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 5
osa00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 10
tae00190 Oxidative phosphorylation 9
tae00561 Glycerolipid metabolism 3
tae00566 Sulfoquinovose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 3
hvu00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 7
hvu01200 Carbon metabolism 6
hvu00010 Glycolysis / Gluconeogenesis 5
hvu01210 2-Oxocarboxylic acid metabolism 4
hvu00020 Citrate cycle (TCA cycle) 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00630 Glyoxylate and dicarboxylate metabolism 4
bdi01200 Carbon metabolism 4
bdi00250 Alanine, aspartate and glutamate metabolism 2
bdi00260 Glycine, serine and threonine metabolism 2
bdi01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 125597792 106382704 103854898 103855784 830739 832410 107940989 107909001 102610025 100305930 100799564 100257686 7497763 7468473 25495085 101251324 102583051 107804760 107825900 4336471 4330096 100193300 100191544 123127824 123401757 123430565 8066198 8056035 100826761 100829876
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