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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106380556   RNA polymerase II transcriptional coactivator KIWI-like 
 ath-u.5   KELP   transcriptional coactivator p15 (PC4) family protein (KELP) 
 ath-u.5   AT5G09240   ssDNA-binding transcriptional regulator 
 ath-u.5   KIWI   ssDNA-binding transcriptional regulator 
 gma-u.5   100820368   RNA polymerase II transcriptional coactivator KIWI-like 
 gma-u.5   100499936   uncharacterized LOC100499936 
 vvi-u.5   100242702   RNA polymerase II transcriptional coactivator KELP 
 vvi-u.5   100245748   RNA polymerase II transcriptional coactivator KIWI 
 ppo-u.5   7466762   RNA polymerase II transcriptional coactivator KIWI 
 ppo-u.5   7467073   RNA polymerase II transcriptional coactivator KELP 
 mtr-u.5   25502212   RNA polymerase II transcriptional coactivator KELP 
 mtr-u.5   11424996   RNA polymerase II transcriptional coactivator KIWI 
 sly-u.5   101257234   RNA polymerase II transcriptional coactivator KIWI-like 
 sly-u.5   101252417   RNA polymerase II transcriptional coactivator KELP 
 osa-u.5   4329646   RNA polymerase II transcriptional coactivator KIWI 
 osa-u.5   4327671   RNA polymerase II transcriptional coactivator KELP 
 zma-u.5   100384655   uncharacterized LOC100384655 
 zma-u.5   100286301   uncharacterized LOC100286301 
 zma-u.5   100285609   RNA polymerase II transcriptional coactivator KELP 

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Top 50 coexpressed genes to 106380556 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106380556 (bna-r.1 coexpression data)

CoexMap"106380556"


bnaLOC106380556 | Entrez gene ID : 106380556    
Species bna ath gma vvi ppo mtr sly osa zma bdi hvu bra cit sbi ghi sot nta cre tae
Paralog 1 3 2 2 2 2 2 2 3 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0060261 [list] [network] positive regulation of transcription initiation by RNA polymerase II  (16 genes)  IEA  
GO CC
GO:0005667 [list] [network] transcription regulator complex  (441 genes)  IEA  
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0003713 [list] [network] transcription coactivator activity  (127 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (6522 genes)  IEA  
Protein XP_013675784.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  nucl 3  (predict for XP_013675784.2)
Subcellular
localization
TargetP
other 8,  mito 3  (predict for XP_013675784.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106380556
ath-u.5
for
KELP
ath-u.5
for
AT5G09240
ath-u.5
for
KIWI
gma-u.5
for
100820368
gma-u.5
for
100499936
vvi-u.5
for
100242702
vvi-u.5
for
100245748
ppo-u.5
for
7466762
ppo-u.5
for
7467073
mtr-u.5
for
25502212
mtr-u.5
for
11424996
sly-u.5
for
101257234
sly-u.5
for
101252417
osa-u.5
for
4329646
osa-u.5
for
4327671
zma-u.5
for
100384655
zma-u.5
for
100286301
zma-u.5
for
100285609


Ortholog ID: 2570
Species bna bna bra bra ath ath ghi ghi cit cit gma vvi vvi ppo ppo mtr sly sly sot sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC106380556 LOC106418990 LOC103847194 LOC103858583 AT5G09240 KIWI LOC107911687 LOC107951169 LOC102607972 LOC102627451 LOC100820368 LOC100242702 LOC100245748 LOC7466762 LOC7467073 LOC25502212 LOC101257234 LOC101252417 LOC102578505 LOC102591666 LOC107767591 LOC107786585 LOC4329646 LOC4327671 LOC100286301 LOC100384655 LOC123112707 LOC123061783 LOC123444225 LOC123399918 LOC8068872 LOC110433498 LOC100838479 LOC100837805 CHLRE_07g325722v5
Function* RNA polymerase II transcriptional coactivator KIWI-like RNA polymerase II transcriptional coactivator KIWI RNA polymerase II transcriptional coactivator KIWI RNA polymerase II transcriptional coactivator KELP ssDNA-binding transcriptional regulator ssDNA-binding transcriptional regulator RNA polymerase II transcriptional coactivator KIWI RNA polymerase II transcriptional coactivator KELP RNA polymerase II transcriptional coactivator KIWI RNA polymerase II transcriptional coactivator KELP RNA polymerase II transcriptional coactivator KIWI-like RNA polymerase II transcriptional coactivator KELP RNA polymerase II transcriptional coactivator KIWI RNA polymerase II transcriptional coactivator KIWI RNA polymerase II transcriptional coactivator KELP RNA polymerase II transcriptional coactivator KELP RNA polymerase II transcriptional coactivator KIWI-like RNA polymerase II transcriptional coactivator KELP RNA polymerase II transcriptional coactivator KELP RNA polymerase II transcriptional coactivator KIWI-like RNA polymerase II transcriptional coactivator KELP-like RNA polymerase II transcriptional coactivator KELP RNA polymerase II transcriptional coactivator KIWI RNA polymerase II transcriptional coactivator KELP uncharacterized LOC100286301 uncharacterized LOC100384655 RNA polymerase II transcriptional coactivator KIWI RNA polymerase II transcriptional coactivator KELP RNA polymerase II transcriptional coactivator KELP RNA polymerase II transcriptional coactivator KIWI-like RNA polymerase II transcriptional coactivator KIWI RNA polymerase II transcriptional coactivator KELP RNA polymerase II transcriptional coactivator KELP RNA polymerase II transcriptional coactivator KIWI uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03250 Viral life cycle - HIV-1 2
bna04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03250 Viral life cycle - HIV-1 2
bna04144 Endocytosis 2
bna00790 Folate biosynthesis 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 3
bra03040 Spliceosome 3
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath03020 RNA polymerase 4
ath03420 Nucleotide excision repair 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
ghi04120 Ubiquitin mediated proteolysis 4
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 2
cit03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 4
gma03410 Base excision repair 4
gma03420 Nucleotide excision repair 4
gma03430 Mismatch repair 4
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 3
vvi03040 Spliceosome 3
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 8
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 10
sly03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 9
nta00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
osa03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 2
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
zma03018 RNA degradation 3
zma03020 RNA polymerase 3
zma03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 3
zma03083 Polycomb repressive complex 2
zma03420 Nucleotide excision repair 2
zma03013 Nucleocytoplasmic transport 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
tae03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 13
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
bdi03440 Homologous recombination 2
bdi03050 Proteasome 2
bdi03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106380556 106418990 103847194 103858583 830783 830784 107911687 107951169 102607972 102627451 100820368 100242702 100245748 7466762 7467073 25502212 101257234 101252417 102578505 102591666 107767591 107786585 4329646 4327671 100286301 100384655 123112707 123061783 123444225 123399918 8068872 110433498 100838479 100837805 5728417
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