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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G04780   Pentatricopeptide repeat (PPR) superfamily protein 
 ghi-r.1   107941409   pentatricopeptide repeat-containing protein At5g04780, mitochondrial 
 cit-r.1   102626818   pentatricopeptide repeat-containing protein At5g04780, mitochondrial 
 mtr-u.5   25485552   pentatricopeptide repeat-containing protein At5g04780, mitochondrial 
 sly-u.5   101245222   pentatricopeptide repeat-containing protein 
 sot-r.1   102597631   pentatricopeptide repeat-containing protein At5g04780 
 nta-r.1   107779420   pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like 
 nta-r.1   107775155   pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like 
 zma-u.5   103640772   pentatricopeptide repeat-containing protein At5g04780, mitochondrial 
 tae-r.2   123054576   pentatricopeptide repeat-containing protein At5g04780, mitochondrial 
 tae-r.2   123190442   pentatricopeptide repeat-containing protein At5g04780, mitochondrial 
 tae-r.2   123046730   pentatricopeptide repeat-containing protein At5g04780, mitochondrial 
 sbi-r.1   8079838   pentatricopeptide repeat-containing protein At5g04780 

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Top 50 coexpressed genes to AT5G04780 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G04780 (ath-u.5 coexpression data)

CoexMap"106382998"


bnaLOC106382998 | Entrez gene ID : 106382998    
Species ath ghi cit mtr sly sot nta zma tae sbi osa bdi vvi bra ppo hvu cre gma bna
Paralog 1 1 1 1 1 1 2 1 3 1 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (870 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (3493 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (3852 genes)  IEA  
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_013678555.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  vacu 3,  mito 1,  extr 1,  E.R._vacu 1  (predict for XP_013678555.2)
Subcellular
localization
TargetP
other 6  (predict for XP_013678555.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ath-u.5
for
AT5G04780
ghi-r.1
for
107941409
cit-r.1
for
102626818
mtr-u.5
for
25485552
sly-u.5
for
101245222
sot-r.1
for
102597631
nta-r.1
for
107779420
nta-r.1
for
107775155
zma-u.5
for
103640772
tae-r.2
for
123054576
tae-r.2
for
123190442
tae-r.2
for
123046730
sbi-r.1
for
8079838


Ortholog ID: 11726
Species ath ghi cit mtr sly sot nta nta zma tae tae tae sbi
Symbol AT5G04780 LOC107941409 LOC102626818 LOC25485552 LOC101245222 LOC102597631 LOC107779420 LOC107775155 LOC103640772 LOC123054576 LOC123190442 LOC123046730 LOC8079838
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At5g04780 pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At5g04780
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 2
tae03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830356 107941409 102626818 25485552 101245222 102597631 107779420 107775155 103640772 123054576 123190442 123046730 8079838
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