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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8079838   pentatricopeptide repeat-containing protein At5g04780 
 zma-u.5   103640772   pentatricopeptide repeat-containing protein At5g04780, mitochondrial 
 ath-u.5   AT5G04780   Pentatricopeptide repeat (PPR) superfamily protein 
 sly-u.5   101245222   pentatricopeptide repeat-containing protein 
 mtr-u.5   25485552   pentatricopeptide repeat-containing protein At5g04780, mitochondrial 

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Top 50 coexpressed genes to 8079838 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8079838 (sbi-r.1 coexpression data)

CoexMap"8079838"


sbiLOC8079838 | Entrez gene ID : 8079838      
Species sbi zma ath sly mtr bra nta osa cre cit vvi ppo hvu bdi sot tae bna ghi gma
Paralog 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002441855.1 [sequence] [blastp]
XP_021302285.1 [sequence] [blastp]
XP_021302286.1 [sequence] [blastp]
XP_021302287.1 [sequence] [blastp]
XP_021302288.1 [sequence] [blastp]
XP_021302289.1 [sequence] [blastp]
XP_021302290.1 [sequence] [blastp]
XP_021302291.1 [sequence] [blastp]
XP_021302292.1 [sequence] [blastp]
XP_021302294.1 [sequence] [blastp]
XP_021302295.1 [sequence] [blastp]
XP_021302296.1 [sequence] [blastp]
XP_021302297.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  vacu 1,  nucl 1,  extr 1,  E.R._vacu 1  (predict for XP_002441855.1)
chlo 7,  vacu 1,  nucl 1,  extr 1,  E.R._vacu 1  (predict for XP_021302285.1)
chlo 7,  vacu 1,  nucl 1,  extr 1,  E.R._vacu 1  (predict for XP_021302286.1)
chlo 7,  vacu 1,  nucl 1,  extr 1,  E.R._vacu 1  (predict for XP_021302287.1)
chlo 7,  vacu 1,  nucl 1,  extr 1,  E.R._vacu 1  (predict for XP_021302288.1)
chlo 7,  vacu 1,  nucl 1,  extr 1,  E.R._vacu 1  (predict for XP_021302289.1)
chlo 7,  vacu 1,  nucl 1,  extr 1,  E.R._vacu 1  (predict for XP_021302290.1)
chlo 7,  vacu 1,  nucl 1,  extr 1,  E.R._vacu 1  (predict for XP_021302291.1)
chlo 7,  vacu 1,  nucl 1,  extr 1,  E.R._vacu 1  (predict for XP_021302292.1)
chlo 7,  mito 2  (predict for XP_021302294.1)
chlo 9,  mito 1  (predict for XP_021302295.1)
chlo 8,  nucl 1,  mito 1,  extr 1  (predict for XP_021302296.1)
nucl 6,  cyto_nucl 4,  cyto 1,  mito 1  (predict for XP_021302297.1)
Subcellular
localization
TargetP
scret 5  (predict for XP_002441855.1)
scret 5  (predict for XP_021302285.1)
scret 5  (predict for XP_021302286.1)
scret 5  (predict for XP_021302287.1)
scret 5  (predict for XP_021302288.1)
scret 5  (predict for XP_021302289.1)
scret 5  (predict for XP_021302290.1)
scret 5  (predict for XP_021302291.1)
scret 5  (predict for XP_021302292.1)
mito 9  (predict for XP_021302294.1)
mito 7  (predict for XP_021302295.1)
mito 9  (predict for XP_021302296.1)
other 8,  mito 6  (predict for XP_021302297.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8079838

.
zma-u.5
for
103640772

.
ath-u.5
for
AT5G04780

.
sly-u.5
for
101245222

.
mtr-u.5
for
25485552

.


Ortholog ID: 11726
Species ath sly zma mtr tae tae ghi sbi sot cit nta nta
Symbol AT5G04780 LOC101245222 LOC103640772 LOC25485552 LOC123046730 LOC123190442 LOC107941409 LOC8079838 LOC102597631 LOC102626818 LOC107779420 LOC107775155
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At5g04780 pentatricopeptide repeat-containing protein At5g04780 pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 2
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830356 101245222 103640772 25485552 123046730 123190442 107941409 8079838 102597631 102626818 107779420 107775155
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