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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106387788   transcription factor mef2A 
 ath-u.5   NUFIP   GATA zinc finger protein 
 gma-u.5   100789443   uncharacterized LOC100789443 
 gma-u.5   100786384   uncharacterized LOC100786384 
 vvi-u.5   100252331   uncharacterized LOC100252331 
 ppo-u.5   7469503   uncharacterized LOC7469503 
 ppo-u.5   7486858   uncharacterized LOC7486858 
 mtr-u.5   25486959   putative uncharacterized protein DDB_G0286901 
 sly-u.5   101251819   uncharacterized LOC101251819 
 zma-u.5   100217067   uncharacterized LOC100217067 

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Top 50 coexpressed genes to 106387788 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106387788 (bna-r.1 coexpression data)

CoexMap"106387788"


bnaLOC106387788 | Entrez gene ID : 106387788    
Species bna ath gma vvi ppo mtr sly zma sot hvu tae cit sbi ghi cre nta bdi bra osa
Paralog 1 1 2 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03015 [list] [network] mRNA surveillance pathway (420 genes)
GO BP
GO:0000492 [list] [network] box C/D snoRNP assembly  (24 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (3852 genes)  IEA  
Protein XP_048599129.1 [sequence] [blastp]
XP_048599130.1 [sequence] [blastp]
XP_048599131.1 [sequence] [blastp]
XP_048599132.1 [sequence] [blastp]
XP_048599133.1 [sequence] [blastp]
XP_048599134.1 [sequence] [blastp]
XP_048599135.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 1,  cyto 1  (predict for XP_048599129.1)
nucl 6,  chlo 1,  cyto 1  (predict for XP_048599130.1)
nucl 6,  chlo 1,  cyto 1  (predict for XP_048599131.1)
nucl 8,  chlo 1,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_048599132.1)
nucl 6,  chlo 1,  cyto 1,  mito 1,  plas 1,  cyto_pero 1,  mito_plas 1,  cyto_E.R. 1  (predict for XP_048599133.1)
nucl 6,  chlo 1,  cyto 1,  mito 1,  plas 1,  cyto_pero 1,  mito_plas 1,  cyto_E.R. 1  (predict for XP_048599134.1)
nucl 6,  chlo 1,  cyto 1,  mito 1,  plas 1,  cyto_pero 1,  mito_plas 1,  cyto_E.R. 1  (predict for XP_048599135.1)
Subcellular
localization
TargetP
mito 8,  other 3  (predict for XP_048599129.1)
mito 8,  other 3  (predict for XP_048599130.1)
mito 8,  other 3  (predict for XP_048599131.1)
mito 8,  other 3  (predict for XP_048599132.1)
mito 8,  other 3  (predict for XP_048599133.1)
mito 8,  other 3  (predict for XP_048599134.1)
mito 8,  other 3  (predict for XP_048599135.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106387788

.
ath-u.5
for
NUFIP

.
gma-u.5
for
100789443

.
gma-u.5
for
100786384

.
vvi-u.5
for
100252331

.
ppo-u.5
for
7469503

.
ppo-u.5
for
7486858

.
mtr-u.5
for
25486959

.
sly-u.5
for
101251819

.
zma-u.5
for
100217067

.


Ortholog ID: 10312
Species ath gma gma sly zma bra vvi ppo ppo mtr tae ghi ghi bna sbi sot cit nta nta
Symbol NUFIP LOC100789443 LOC100786384 LOC101251819 LOC100217067 LOC103845836 LOC100252331 LOC7486858 LOC7469503 LOC25486959 LOC123071170 LOC107955361 LOC107923434 LOC106387788 LOC8055285 LOC102599911 LOC102622087 LOC107797885 LOC107817723
Function* GATA zinc finger protein uncharacterized LOC100789443 uncharacterized LOC100786384 uncharacterized LOC101251819 uncharacterized LOC100217067 transcription factor mef2A uncharacterized LOC100252331 uncharacterized LOC7486858 uncharacterized LOC7469503 putative uncharacterized protein DDB_G0286901 uncharacterized LOC123071170 homeobox protein 4 uncharacterized LOC107923434 transcription factor mef2A uncharacterized LOC8055285 uncharacterized LOC102599911 uncharacterized LOC102622087 uncharacterized LOC107797885 uncharacterized LOC107817723
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 6
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 11
tae03020 RNA polymerase 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 5
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
sot03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta03008 Ribosome biogenesis in eukaryotes 2
nta03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831962 100789443 100786384 101251819 100217067 103845836 100252331 7486858 7469503 25486959 123071170 107955361 107923434 106387788 8055285 102599911 102622087 107797885 107817723
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