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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106387928   luc7-like protein 3 
 bna-r.1   106345880   luc7-like protein 3 
 bna-r.1   106402553   luc7-like protein 3 
 bna-r.1   111209314   luc7-like protein 3 
 bra-r.6   103857185   luc7-like protein 3 
 ath-u.5   AT5G51410   LUC7 N terminus domain-containing protein 
 ghi-r.1   107933485   luc7-like protein 3 
 ghi-r.1   107924608   luc7-like protein 3 
 ghi-r.1   107955123   luc7-like protein 3 
 cit-r.1   102607308   uncharacterized LOC102607308 
 gma-u.5   100796657   luc7-like protein 3 
 gma-u.5   100792348   luc7-like protein 3-like 
 vvi-u.5   100265629   uncharacterized LOC100265629 
 ppo-u.5   18094007   uncharacterized LOC18094007 
 ppo-u.5   7479200   uncharacterized LOC7479200 
 mtr-u.5   25479448   luc7-like protein 3 
 sly-u.5   101259518   uncharacterized LOC101259518 
 sot-r.1   102597458   luc7-like protein 3 
 nta-r.1   107797406   uncharacterized LOC107797406 
 nta-r.1   107785654   uncharacterized LOC107785654 
 osa-u.5   4343144   uncharacterized LOC4343144 
 zma-u.5   100193186   LUC7 N_terminus domain-containing protein 
 zma-u.5   103632296   luc7-like protein 3 
 tae-r.2   123124010   luc7-like protein 3 
 tae-r.2   123114517   luc7-like protein 3 
 tae-r.2   123155675   luc7-like protein 3 
 hvu-r.1   123395276   luc7-like protein 3 
 sbi-r.1   8059758   luc7-like protein 3 
 bdi-r.1   100821843   luc7-like protein 3 
 bdi-r.1   100842527   luc7-like protein 3 
 cre-r.1   CHLRE_14g621300v5   uncharacterized protein 

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Top 50 coexpressed genes to 106387928 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106387928 (bna-r.1 coexpression data)

CoexMap"106387928"


bnaLOC106387928 | Entrez gene ID : 106387928    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 1 3 1 2 1 2 1 1 1 2 1 2 3 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006376 [list] [network] mRNA splice site recognition  (27 genes)  IEA  
GO CC
GO:0005685 [list] [network] U1 snRNP  (102 genes)  IEA  
GO:0071004 [list] [network] U2-type prespliceosome  (106 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (918 genes)  IEA  
Protein XP_048608342.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 1,  chlo 1,  plas 1,  pero 1,  cysk 1,  cysk_plas 1,  cyto_E.R. 1  (predict for XP_048608342.1)
Subcellular
localization
TargetP
other 8  (predict for XP_048608342.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106387928
bna-r.1
for
106345880
bna-r.1
for
106402553
bna-r.1
for
111209314
bra-r.6
for
103857185
ath-u.5
for
AT5G51410
ghi-r.1
for
107933485
ghi-r.1
for
107924608
ghi-r.1
for
107955123
cit-r.1
for
102607308
gma-u.5
for
100796657
gma-u.5
for
100792348
vvi-u.5
for
100265629
ppo-u.5
for
18094007
ppo-u.5
for
7479200
mtr-u.5
for
25479448
sly-u.5
for
101259518
sot-r.1
for
102597458
nta-r.1
for
107797406
nta-r.1
for
107785654
osa-u.5
for
4343144
zma-u.5
for
100193186
zma-u.5
for
103632296
tae-r.2
for
123124010
tae-r.2
for
123114517
tae-r.2
for
123155675
hvu-r.1
for
123395276
sbi-r.1
for
8059758
bdi-r.1
for
100821843
bdi-r.1
for
100842527
cre-r.1
for
CHLRE_14g621300v5


Ortholog ID: 7372
Species bna bna bna bra ath ghi ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi bdi cre
Symbol LOC106387928 LOC106345880 LOC111209314 LOC103857185 AT5G51410 LOC107933485 LOC107924608 LOC107955123 LOC102607308 LOC100796657 LOC100792348 LOC100265629 LOC18094007 LOC7479200 LOC25479448 LOC101259518 LOC102597458 LOC107797406 LOC107785654 LOC4343144 LOC100193186 LOC103632296 LOC123124010 LOC123114517 LOC123155675 LOC123395276 LOC8059758 LOC100821843 LOC100842527 CHLRE_14g621300v5
Function* luc7-like protein 3 luc7-like protein 3 luc7-like protein 3 luc7-like protein 3 LUC7 N terminus domain-containing protein luc7-like protein 3 luc7-like protein 3 luc7-like protein 3 uncharacterized LOC102607308 luc7-like protein 3 luc7-like protein 3-like uncharacterized LOC100265629 uncharacterized LOC18094007 uncharacterized LOC7479200 luc7-like protein 3 uncharacterized LOC101259518 luc7-like protein 3 uncharacterized LOC107797406 uncharacterized LOC107785654 uncharacterized LOC4343144 LUC7 N_terminus domain-containing protein luc7-like protein 3 luc7-like protein 3 luc7-like protein 3 luc7-like protein 3 luc7-like protein 3 luc7-like protein 3 luc7-like protein 3 luc7-like protein 3 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 4
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 6
ath03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03015 mRNA surveillance pathway 4
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo03250 Viral life cycle - HIV-1 2
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 12
tae03013 Nucleocytoplasmic transport 4
tae03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 5
sbi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 2
bdi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106387928 106345880 111209314 103857185 835215 107933485 107924608 107955123 102607308 100796657 100792348 100265629 18094007 7479200 25479448 101259518 102597458 107797406 107785654 4343144 100193186 103632296 123124010 123114517 123155675 123395276 8059758 100821843 100842527 5715901
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