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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106388476   elongator complex protein 3 
 bna-r.1   106388421   elongator complex protein 3 
 bra-r.6   103858446   elongator complex protein 3 
 ath-u.5   ELO3   radical SAM domain-containing protein / GCN5-related N-acetyltransferase (GNAT) family protein 
 ghi-r.1   107912092   elongator complex protein 3 
 ghi-r.1   121232062   elongator complex protein 3 
 ghi-r.1   107924612   elongator complex protein 3 
 cit-r.1   102620271   elongator complex protein 3 
 gma-u.5   100784961   elongator complex protein 3 
 gma-u.5   100818764   elongator complex protein 3 
 vvi-u.5   100263356   elongator complex protein 3 
 ppo-u.5   7454685   elongator complex protein 3 
 mtr-u.5   25485384   elongator complex protein 3 
 sly-u.5   101246236   elongator complex protein 3 
 sot-r.1   102595777   elongator complex protein 3 
 nta-r.1   107827149   elongator complex protein 3 
 nta-r.1   107794823   elongator complex protein 3 
 osa-u.5   4336205   elongator complex protein 3-like 
 zma-u.5   100216833   uncharacterized LOC100216833 
 zma-u.5   100383540   Elongator complex protein 3 
 tae-r.2   123045801   elongator complex protein 3 
 tae-r.2   123189568   elongator complex protein 3 
 tae-r.2   780629   elongator complex protein 3 
 hvu-r.1   123427047   elongator complex protein 3 
 sbi-r.1   8073682   elongator complex protein 3 
 bdi-r.1   100826613   elongator complex protein 3 
 cre-r.1   CHLRE_07g354100v5   uncharacterized protein 

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Top 50 coexpressed genes to 106388476 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106388476 (bna-r.1 coexpression data)

CoexMap"106388476"


bnaLOC106388476 | Entrez gene ID : 106388476    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 3 1 2 1 1 1 1 1 2 1 2 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0002926 [list] [network] tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation  (4 genes)  IEA  
GO CC
GO:0033588 [list] [network] elongator holoenzyme complex  (14 genes)  IEA  
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (16489 genes)  IEA  
GO MF
GO:0051536 [list] [network] iron-sulfur cluster binding  (262 genes)  IEA  
GO:0016747 [list] [network] acyltransferase activity, transferring groups other than amino-acyl groups  (954 genes)  IEA  
Protein XP_013684004.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  mito 1,  pero 1  (predict for XP_013684004.1)
Subcellular
localization
TargetP
other 8  (predict for XP_013684004.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106388476
bna-r.1
for
106388421
bra-r.6
for
103858446
ath-u.5
for
ELO3
ghi-r.1
for
107912092
ghi-r.1
for
121232062
ghi-r.1
for
107924612
cit-r.1
for
102620271
gma-u.5
for
100784961
gma-u.5
for
100818764
vvi-u.5
for
100263356
ppo-u.5
for
7454685
mtr-u.5
for
25485384
sly-u.5
for
101246236
sot-r.1
for
102595777
nta-r.1
for
107827149
nta-r.1
for
107794823
osa-u.5
for
4336205
zma-u.5
for
100216833
zma-u.5
for
100383540
tae-r.2
for
123045801
tae-r.2
for
123189568
tae-r.2
for
780629
hvu-r.1
for
123427047
sbi-r.1
for
8073682
bdi-r.1
for
100826613
cre-r.1
for
CHLRE_07g354100v5


Ortholog ID: 8647
Species bna bna bra ath ghi ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC106388476 LOC106388421 LOC103858446 ELO3 LOC107912092 LOC121232062 LOC107924612 LOC102620271 LOC100784961 LOC100818764 LOC100263356 LOC7454685 LOC25485384 LOC101246236 LOC102595777 LOC107827149 LOC107794823 LOC4336205 LOC100216833 LOC100383540 LOC123045801 LOC123189568 LOC780629 LOC123427047 LOC8073682 LOC100826613 CHLRE_07g354100v5
Function* elongator complex protein 3 elongator complex protein 3 elongator complex protein 3 radical SAM domain-containing protein / GCN5-related N-acetyltransferase (GNAT) family protein elongator complex protein 3 elongator complex protein 3 elongator complex protein 3 elongator complex protein 3 elongator complex protein 3 elongator complex protein 3 elongator complex protein 3 elongator complex protein 3 elongator complex protein 3 elongator complex protein 3 elongator complex protein 3 elongator complex protein 3 elongator complex protein 3 elongator complex protein 3-like uncharacterized LOC100216833 Elongator complex protein 3 elongator complex protein 3 elongator complex protein 3 elongator complex protein 3 elongator complex protein 3 elongator complex protein 3 elongator complex protein 3 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 8
bna04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 6
bna04141 Protein processing in endoplasmic reticulum 5
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 3
bra03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03013 Nucleocytoplasmic transport 3
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03082 ATP-dependent chromatin remodeling 2
ghi03083 Polycomb repressive complex 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 9
ghi03082 ATP-dependent chromatin remodeling 2
ghi03083 Polycomb repressive complex 2
ghi00590 Arachidonic acid metabolism 2
ghi00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03082 ATP-dependent chromatin remodeling 2
ghi03083 Polycomb repressive complex 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01230 Biosynthesis of amino acids 3
cit03010 Ribosome 3
cit00290 Valine, leucine and isoleucine biosynthesis 2
cit00770 Pantothenate and CoA biosynthesis 2
cit01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 2
vvi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00620 Pyruvate metabolism 3
ppo01200 Carbon metabolism 3
ppo00020 Citrate cycle (TCA cycle) 2
ppo00270 Cysteine and methionine metabolism 2
ppo00566 Sulfoquinovose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 3
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01230 Biosynthesis of amino acids 4
sot00290 Valine, leucine and isoleucine biosynthesis 3
sot00770 Pantothenate and CoA biosynthesis 3
sot01210 2-Oxocarboxylic acid metabolism 3
sot04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03040 Spliceosome 2
nta04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
osa04141 Protein processing in endoplasmic reticulum 2
osa03010 Ribosome 2
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
zma03082 ATP-dependent chromatin remodeling 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 3
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 4
sbi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00230 Purine metabolism 4
cre00220 Arginine biosynthesis 3
cre00250 Alanine, aspartate and glutamate metabolism 3
cre01230 Biosynthesis of amino acids 3
cre01240 Biosynthesis of cofactors 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106388476 106388421 103858446 835098 107912092 121232062 107924612 102620271 100784961 100818764 100263356 7454685 25485384 101246236 102595777 107827149 107794823 4336205 100216833 100383540 123045801 123189568 780629 123427047 8073682 100826613 5727582
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