Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT4G01270   RING/U-box superfamily protein 
 gma-u.5   100812811   E3 ubiquitin-protein ligase trul-1 
 ppo-u.5   7496992   uncharacterized LOC7496992 
 mtr-u.5   25500826   E3 ubiquitin-protein ligase trul-1 
 sly-u.5   101255628   uncharacterized LOC101255628 
 sly-u.5   101254901   uncharacterized LOC101254901 
 osa-u.5   4344669   uncharacterized LOC4344669 
 zma-u.5   100279207   putative RING zinc finger domain superfamily protein 

close


Top 50 coexpressed genes to AT4G01270 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AT4G01270 (ath-u.5 coexpression data)

CoexMap"106388726"


bnaLOC106388726 | Entrez gene ID : 106388726    
Species ath gma ppo mtr sly osa zma hvu vvi bna cit bra ghi sbi bdi nta tae cre sot
Paralog 1 1 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_013684326.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 1,  extr 1,  pero 1,  cyto_pero 1  (predict for XP_013684326.1)
Subcellular
localization
TargetP
other 6,  scret 3  (predict for XP_013684326.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ath-u.5
for
AT4G01270
gma-u.5
for
100812811
ppo-u.5
for
7496992
mtr-u.5
for
25500826
sly-u.5
for
101255628
sly-u.5
for
101254901
osa-u.5
for
4344669
zma-u.5
for
100279207


Ortholog ID: 6936
Species ath ghi ghi gma ppo mtr sly sly sot sot nta nta osa zma tae tae hvu sbi bdi
Symbol AT4G01270 LOC107911501 LOC107923086 LOC100812811 LOC7496992 LOC25500826 LOC101255628 LOC101254901 LOC102582280 LOC102584672 LOC107810576 LOC107814997 LOC4344669 LOC100279207 LOC123162423 LOC123147393 LOC123407052 LOC8076562 LOC100821625
Function* RING/U-box superfamily protein E3 ubiquitin-protein ligase TRAIP E3 ubiquitin-protein ligase TRAIP E3 ubiquitin-protein ligase trul-1 uncharacterized LOC7496992 E3 ubiquitin-protein ligase trul-1 uncharacterized LOC101255628 uncharacterized LOC101254901 E3 ubiquitin-protein ligase TRAIP uncharacterized LOC102584672 uncharacterized LOC107810576 uncharacterized LOC107814997 uncharacterized LOC4344669 putative RING zinc finger domain superfamily protein uncharacterized LOC123162423 E3 ubiquitin-protein ligase TRAIP E3 ubiquitin-protein ligase TRAIP-like uncharacterized LOC8076562 uncharacterized LOC100821625
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03440 Homologous recombination 4
ath03030 DNA replication 4
ath03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 3
ghi03460 Fanconi anemia pathway 2
ghi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 3
ghi03460 Fanconi anemia pathway 2
ghi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 3
ppo03440 Homologous recombination 3
ppo03420 Nucleotide excision repair 2
ppo03430 Mismatch repair 2
ppo03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 11
mtr00670 One carbon pool by folate 7
mtr00270 Cysteine and methionine metabolism 6
mtr00400 Phenylalanine, tyrosine and tryptophan biosynthesis 5
mtr00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta03082 ATP-dependent chromatin remodeling 4
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 11
zma03420 Nucleotide excision repair 3
zma03430 Mismatch repair 3
zma03440 Homologous recombination 2
zma03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 5
tae03420 Nucleotide excision repair 3
tae03430 Mismatch repair 3
tae03440 Homologous recombination 3
tae03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 6
tae03420 Nucleotide excision repair 4
tae03430 Mismatch repair 4
tae03440 Homologous recombination 4
tae03460 Fanconi anemia pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 2
hvu03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 7
bdi03440 Homologous recombination 2
bdi03460 Fanconi anemia pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828038 107911501 107923086 100812811 7496992 25500826 101255628 101254901 102582280 102584672 107810576 107814997 4344669 100279207 123162423 123147393 123407052 8076562 100821625
The preparation time of this page was 0.1 [sec].