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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123407052   E3 ubiquitin-protein ligase TRAIP-like 
 tae-r.2   123147393   E3 ubiquitin-protein ligase TRAIP 
 tae-r.2   123168393   E3 ubiquitin-protein ligase TRAIP 
 tae-r.2   123162423   uncharacterized LOC123162423 
 bdi-r.1   100821625   uncharacterized LOC100821625 
 osa-u.5   4344669   uncharacterized LOC4344669 
 zma-u.5   100279207   putative RING zinc finger domain superfamily protein 
 sbi-r.1   8076562   uncharacterized LOC8076562 
 ath-u.5   AT4G01270   RING/U-box superfamily protein 
 gma-u.5   100812811   E3 ubiquitin-protein ligase trul-1 
 sly-u.5   101255628   uncharacterized LOC101255628 
 sly-u.5   101254901   uncharacterized LOC101254901 
 ppo-u.5   7496992   uncharacterized LOC7496992 
 mtr-u.5   25500826   E3 ubiquitin-protein ligase trul-1 
 ghi-r.1   107923086   E3 ubiquitin-protein ligase TRAIP 
 ghi-r.1   107911501   E3 ubiquitin-protein ligase TRAIP 
 sot-r.1   102584672   uncharacterized LOC102584672 
 sot-r.1   102582280   E3 ubiquitin-protein ligase TRAIP 
 nta-r.1   107814997   uncharacterized LOC107814997 
 nta-r.1   107810576   uncharacterized LOC107810576 
 nta-r.1   107771293   uncharacterized LOC107771293 

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Top 50 coexpressed genes to 123407052 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123407052 (hvu-r.1 coexpression data)

CoexMap"123407052"


hvuLOC123407052 | Entrez gene ID : 123407052    
Species hvu tae bdi osa zma sbi ath gma sly ppo mtr ghi sot nta bra cre cit bna vvi
Paralog 1 3 1 1 1 1 1 1 2 1 1 2 2 3 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_044956023.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  extr 2,  cyto_nucl 2,  chlo 1,  pero 1  (predict for XP_044956023.1)
Subcellular
localization
TargetP
other 7  (predict for XP_044956023.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123407052
tae-r.2
for
123147393
tae-r.2
for
123168393
tae-r.2
for
123162423
bdi-r.1
for
100821625
osa-u.5
for
4344669
zma-u.5
for
100279207
sbi-r.1
for
8076562
ath-u.5
for
AT4G01270
gma-u.5
for
100812811
sly-u.5
for
101255628
sly-u.5
for
101254901
ppo-u.5
for
7496992
mtr-u.5
for
25500826
ghi-r.1
for
107923086
ghi-r.1
for
107911501
sot-r.1
for
102584672
sot-r.1
for
102582280
nta-r.1
for
107814997
nta-r.1
for
107810576
nta-r.1
for
107771293


Ortholog ID: 6936
Species hvu tae tae tae bdi osa zma sbi ath gma sly sly ppo mtr ghi ghi sot sot nta nta nta
Symbol LOC123407052 LOC123147393 LOC123168393 LOC123162423 LOC100821625 LOC4344669 LOC100279207 LOC8076562 AT4G01270 LOC100812811 LOC101255628 LOC101254901 LOC7496992 LOC25500826 LOC107923086 LOC107911501 LOC102584672 LOC102582280 LOC107814997 LOC107810576 LOC107771293
Function* E3 ubiquitin-protein ligase TRAIP-like E3 ubiquitin-protein ligase TRAIP E3 ubiquitin-protein ligase TRAIP uncharacterized LOC123162423 uncharacterized LOC100821625 uncharacterized LOC4344669 putative RING zinc finger domain superfamily protein uncharacterized LOC8076562 RING/U-box superfamily protein E3 ubiquitin-protein ligase trul-1 uncharacterized LOC101255628 uncharacterized LOC101254901 uncharacterized LOC7496992 E3 ubiquitin-protein ligase trul-1 E3 ubiquitin-protein ligase TRAIP E3 ubiquitin-protein ligase TRAIP uncharacterized LOC102584672 E3 ubiquitin-protein ligase TRAIP uncharacterized LOC107814997 uncharacterized LOC107810576 uncharacterized LOC107771293
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 2
hvu03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 6
tae03420 Nucleotide excision repair 4
tae03430 Mismatch repair 4
tae03440 Homologous recombination 4
tae03460 Fanconi anemia pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 5
tae03420 Nucleotide excision repair 3
tae03430 Mismatch repair 3
tae03440 Homologous recombination 3
tae03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 7
bdi03440 Homologous recombination 2
bdi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 11
zma03420 Nucleotide excision repair 3
zma03430 Mismatch repair 3
zma03440 Homologous recombination 2
zma03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03440 Homologous recombination 4
ath03030 DNA replication 4
ath03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 3
ppo03440 Homologous recombination 3
ppo03420 Nucleotide excision repair 2
ppo03430 Mismatch repair 2
ppo03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 11
mtr00670 One carbon pool by folate 7
mtr00270 Cysteine and methionine metabolism 6
mtr00400 Phenylalanine, tyrosine and tryptophan biosynthesis 5
mtr00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 3
ghi03460 Fanconi anemia pathway 2
ghi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 3
ghi03460 Fanconi anemia pathway 2
ghi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta03082 ATP-dependent chromatin remodeling 4
nta03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123407052 123147393 123168393 123162423 100821625 4344669 100279207 8076562 828038 100812811 101255628 101254901 7496992 25500826 107923086 107911501 102584672 102582280 107814997 107810576 107771293
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