ATTED-II : GeneCoexpression result

Species	Gene	Description
bna-r.1	106388937	serine/threonine-protein phosphatase 4 regulatory subunit 3
ath-u.5	AT3G06670	binding protein
ath-u.5	AT5G49390	serine/threonine-protein phosphatase 4 regulatory subunit-like protein
gma-u.5	100802657	serine/threonine-protein phosphatase 4 regulatory subunit 3A
gma-u.5	100786790	serine/threonine-protein phosphatase 4 regulatory subunit 3
gma-u.5	100775758	serine/threonine-protein phosphatase 4 regulatory subunit 3
vvi-u.5	100241492	uncharacterized LOC100241492
ppo-u.5	7482268	uncharacterized LOC7482268
ppo-u.5	7485913	uncharacterized LOC7485913
mtr-u.5	11422056	serine/threonine-protein phosphatase 4 regulatory subunit 3
mtr-u.5	11415143	serine/threonine-protein phosphatase 4 regulatory subunit 3
sly-u.5	101266318	uncharacterized LOC101266318
sly-u.5	101260566	uncharacterized LOC101260566
osa-u.5	4326847	uncharacterized LOC4326847
osa-u.5	4337863	uncharacterized LOC4337863
zma-u.5	100502168	uncharacterized LOC100502168
zma-u.5	103650148	serine/threonine-protein phosphatase 4 regulatory subunit 3B

Annotation

functional annotation

KEGG

GO BP

GO:0006470 [list] [network] protein dephosphorylation

(391 genes)

IEA

GO CC

GO:0030289 [list] [network] protein phosphatase 4 complex	(13 genes)	IEA
GO:0005654 [list] [network] nucleoplasm	(630 genes)	IEA

GO MF

GO:0072542 [list] [network] protein phosphatase activator activity

(15 genes)

IEA

Protein

XP_048606096.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, chlo 1, cyto 1, plas 1, vacu 1, chlo_mito 1, cyto_plas 1

(predict for XP_048606096.1)

Subcellular
localization
TargetP

other 6, chlo 4

(predict for XP_048606096.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106388937 .	ath-u.5 for AT3G06670 .	ath-u.5 for AT5G49390 .	gma-u.5 for 100802657 .	gma-u.5 for 100786790 .	gma-u.5 for 100775758 .	vvi-u.5 for 100241492 .	ppo-u.5 for 7482268 .	ppo-u.5 for 7485913 .	mtr-u.5 for 11422056 .	mtr-u.5 for 11415143 .	sly-u.5 for 101266318 .	sly-u.5 for 101260566 .	osa-u.5 for 4326847 .	osa-u.5 for 4337863 .	zma-u.5 for 100502168 .	zma-u.5 for 103650148 .

Ortholog

Ortholog ID: 4070

Species

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

cre

sbi

sot

cit

bdi

nta

Symbol

Function^*

binding protein

serine/threonine-protein phosphatase 4 regulatory subunit-like protein

serine/threonine-protein phosphatase 4 regulatory subunit 3

serine/threonine-protein phosphatase 4 regulatory subunit 3A

uncharacterized LOC101260566

uncharacterized LOC101266318

uncharacterized LOC4326847

uncharacterized LOC4337863

serine/threonine-protein phosphatase 4 regulatory subunit 3B

uncharacterized LOC100502168

serine/threonine-protein phosphatase 4 regulatory subunit 3

uncharacterized LOC100241492

uncharacterized LOC7482268

uncharacterized LOC7485913

serine/threonine-protein phosphatase 4 regulatory subunit 3

serine/threonine-protein phosphatase 4 regulatory subunit 3B

serine/threonine-protein phosphatase 4 regulatory subunit 3

serine/threonine-protein phosphatase 4 regulatory subunit 3-like

uncharacterized protein

serine/threonine-protein phosphatase 4 regulatory subunit 3

uncharacterized LOC102624367

serine/threonine-protein phosphatase 4 regulatory subunit 3

uncharacterized LOC107829856

uncharacterized LOC107766687

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	2
ath03015	mRNA surveillance pathway	2
ath00562	Inositol phosphate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00562	Inositol phosphate metabolism	2
gma04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03018	RNA degradation	2
sly03015	mRNA surveillance pathway	2
sly04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	5
osa03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03013	Nucleocytoplasmic transport	3
zma03040	Spliceosome	3
zma03015	mRNA surveillance pathway	2
zma04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03013	Nucleocytoplasmic transport	2
zma03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	3
tae04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00280	Valine, leucine and isoleucine degradation	2
ghi00410	beta-Alanine metabolism	2
ghi00640	Propanoate metabolism	2
ghi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	2
bna00562	Inositol phosphate metabolism	2
bna04070	Phosphatidylinositol signaling system	2
bna03022	Basal transcription factors	2
bna03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	2
bna00562	Inositol phosphate metabolism	2
bna04070	Phosphatidylinositol signaling system	2
bna03022	Basal transcription factors	2
bna03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03015	mRNA surveillance pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03015	mRNA surveillance pathway	2

Expression

Expression pattern

Entrez Gene ID^*

819852

834999

100775758

100802657

101260566

101266318

4326847

4337863

103650148

100502168

103870724

103849737

100241492

7482268

7485913

11415143

11422056

123069818

123078368

123443640

107930129

107896621

106400534

106389041

5717297

8086323

102602525

102583086

102624367

100842638

107829856

107766687

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 106388937 (bna-r.1 coexpression data)

Top 50 enrichment test to 106388937 (bna-r.1 coexpression data)


Species	bna	ath	gma	vvi	ppo	mtr	sly	osa	zma	cre	ghi	cit	hvu	bdi	sot	bra	sbi	tae	nta
Paralog	1	2	3	1	2	2	2	2	2	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 106388937 (bna-r.1 coexpression data)

Top 50 enrichment test to 106388937 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**