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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106392474   ribonuclease III domain-containing protein RNC1, chloroplastic-like 
 ath-u.5   AT4G37510   Ribonuclease III family protein 
 gma-u.5   100819140   ribonuclease III domain-containing protein RNC1, chloroplastic 
 gma-u.5   100814070   ribonuclease III domain-containing protein RNC1, chloroplastic 
 gma-u.5   100809155   ribonuclease III domain-containing protein RNC1, chloroplastic 
 vvi-u.5   100254381   ribonuclease III domain-containing protein RNC1, chloroplastic 
 ppo-u.5   18101132   ribonuclease III domain-containing protein RNC1, chloroplastic 
 mtr-u.5   11409303   ribonuclease III domain-containing protein RNC1, chloroplastic 
 mtr-u.5   11415499   ribonuclease III domain-containing protein RNC1, chloroplastic 
 sly-u.5   101253437   ribonuclease III domain-containing protein RNC1, chloroplastic 
 osa-u.5   4327567   Ribonuclease III domain-containing protein RNC1, chloroplastic 
 zma-u.5   100125654   ribonuclease III domain protein 1 

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Top 50 coexpressed genes to 106392474 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106392474 (bna-r.1 coexpression data)

CoexMap"106392474"


bnaLOC106392474 | Entrez gene ID : 106392474    
Species bna ath gma vvi ppo mtr sly osa zma bdi hvu bra cit sbi ghi sot nta cre tae
Paralog 1 1 3 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006364 [list] [network] rRNA processing  (647 genes)  IEA  
GO:0010468 [list] [network] regulation of gene expression  (6396 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0004525 [list] [network] ribonuclease III activity  (28 genes)  IEA  
GO:0003725 [list] [network] double-stranded RNA binding  (31 genes)  IEA  
Protein XP_013688971.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 4  (predict for XP_013688971.2)
Subcellular
localization
TargetP
chlo 8  (predict for XP_013688971.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106392474
ath-u.5
for
AT4G37510
gma-u.5
for
100819140
gma-u.5
for
100814070
gma-u.5
for
100809155
vvi-u.5
for
100254381
ppo-u.5
for
18101132
mtr-u.5
for
11409303
mtr-u.5
for
11415499
sly-u.5
for
101253437
osa-u.5
for
4327567
zma-u.5
for
100125654


Ortholog ID: 9628
Species bna bna bra ath ghi ghi cit gma gma vvi ppo mtr mtr sly sot nta nta osa zma tae hvu sbi bdi
Symbol LOC106392474 LOC106426857 LOC103859321 AT4G37510 LOC107925611 LOC107945359 LOC102611521 LOC100809155 LOC100819140 LOC100254381 LOC18101132 LOC11409303 LOC11415499 LOC101253437 LOC102584750 LOC107789409 LOC107830377 LOC4327567 LOC100125654 LOC123079495 LOC123444652 LOC8082418 LOC100822105
Function* ribonuclease III domain-containing protein RNC1, chloroplastic-like ribonuclease III domain-containing protein RNC1, chloroplastic ribonuclease III domain-containing protein RNC1, chloroplastic Ribonuclease III family protein ribonuclease III domain-containing protein RNC1, chloroplastic ribonuclease III domain-containing protein RNC1, chloroplastic ribonuclease III domain-containing protein RNC1, chloroplastic ribonuclease III domain-containing protein RNC1, chloroplastic ribonuclease III domain-containing protein RNC1, chloroplastic ribonuclease III domain-containing protein RNC1, chloroplastic ribonuclease III domain-containing protein RNC1, chloroplastic ribonuclease III domain-containing protein RNC1, chloroplastic ribonuclease III domain-containing protein RNC1, chloroplastic ribonuclease III domain-containing protein RNC1, chloroplastic uncharacterized LOC102584750 ribonuclease III domain-containing protein RNC1, chloroplastic-like ribonuclease III domain-containing protein RNC1, chloroplastic Ribonuclease III domain-containing protein RNC1, chloroplastic ribonuclease III domain protein 1 ribonuclease III domain-containing protein RNC1, chloroplastic ribonuclease III domain-containing protein RNC1, chloroplastic ribonuclease III domain-containing protein RNC1, chloroplastic ribonuclease III domain-containing protein RNC1, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 3
gma00220 Arginine biosynthesis 2
gma00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 5
mtr00860 Porphyrin metabolism 3
mtr01240 Biosynthesis of cofactors 3
mtr00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00520 Amino sugar and nucleotide sugar metabolism 2
bdi00561 Glycerolipid metabolism 2
bdi00566 Sulfoquinovose metabolism 2
bdi01250 Biosynthesis of nucleotide sugars 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106392474 106426857 103859321 829906 107925611 107945359 102611521 100809155 100819140 100254381 18101132 11409303 11415499 101253437 102584750 107789409 107830377 4327567 100125654 123079495 123444652 8082418 100822105
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