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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106394402   putative RING-H2 finger protein ATL71 
 ath-u.5   AT3G58720   RING/U-box superfamily protein 
 gma-u.5   100819139   E3 ubiquitin-protein ligase RNF133 
 gma-u.5   100802085   E3 ubiquitin-protein ligase RNF133 
 vvi-u.5   104880832   putative RING-H2 finger protein ATL71 
 vvi-u.5   100853556   E3 ubiquitin ligase BIG BROTHER-related 
 ppo-u.5   7457994   uncharacterized LOC7457994 
 mtr-u.5   11444628   probable E3 ubiquitin-protein ligase ZFP1 
 sly-u.5   101266431   uncharacterized LOC101266431 
 osa-u.5   4346798   E3 ubiquitin-protein ligase SIRP1-like 
 zma-u.5   103647376   RING finger protein 165 

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Top 50 coexpressed genes to 106394402 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106394402 (bna-r.1 coexpression data)

CoexMap"106394402"


bnaLOC106394402 | Entrez gene ID : 106394402    
Species bna ath gma vvi ppo mtr sly osa zma hvu sot tae nta bra cit ghi bdi sbi cre
Paralog 1 1 2 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (910 genes)  IEA  
GO CC
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (605 genes)  IEA  
Protein XP_013690427.2 [sequence] [blastp]
XP_013690428.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_013690427.2)
nucl 6,  cyto 4  (predict for XP_013690428.2)
Subcellular
localization
TargetP
chlo 5,  other 4  (predict for XP_013690427.2)
other 5,  chlo 4  (predict for XP_013690428.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106394402

.
ath-u.5
for
AT3G58720

.
gma-u.5
for
100819139

.
gma-u.5
for
100802085

.
vvi-u.5
for
104880832

.
vvi-u.5
for
100853556

.
ppo-u.5
for
7457994

.
mtr-u.5
for
11444628

.
sly-u.5
for
101266431

.
osa-u.5
for
4346798

.
zma-u.5
for
103647376

.


Ortholog ID: 9545
Species ath gma sly osa zma bra bra vvi ppo mtr ghi ghi bna sbi sot cit nta nta
Symbol AT3G58720 LOC100802085 LOC101266431 LOC4346798 LOC103647376 LOC103830180 LOC103841747 LOC100853556 LOC7457994 LOC11444628 LOC107911762 LOC107959990 LOC106394402 LOC8055547 LOC102581312 LOC102620774 LOC107821632 LOC107762805
Function* RING/U-box superfamily protein E3 ubiquitin-protein ligase RNF133 uncharacterized LOC101266431 E3 ubiquitin-protein ligase SIRP1-like RING finger protein 165 RING-H2 finger protein ATL52 E3 ubiquitin-protein ligase RDUF1 E3 ubiquitin ligase BIG BROTHER-related uncharacterized LOC7457994 probable E3 ubiquitin-protein ligase ZFP1 uncharacterized LOC107911762 uncharacterized LOC107959990 putative RING-H2 finger protein ATL71 E3 ubiquitin-protein ligase RNF165 RING finger protein 44 uncharacterized LOC102620774 uncharacterized LOC107821632 uncharacterized LOC107762805
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 3
mtr00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04016 MAPK signaling pathway - plant 3
sbi04141 Protein processing in endoplasmic reticulum 2
sbi04070 Phosphatidylinositol signaling system 2
sbi04075 Plant hormone signal transduction 2
sbi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 3
sot03083 Polycomb repressive complex 2
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00562 Inositol phosphate metabolism 2
cit04070 Phosphatidylinositol signaling system 2
cit00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 5
nta03083 Polycomb repressive complex 4
nta04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 5
nta03083 Polycomb repressive complex 4
nta04120 Ubiquitin mediated proteolysis 4
nta00561 Glycerolipid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825041 100802085 101266431 4346798 103647376 103830180 103841747 100853556 7457994 11444628 107911762 107959990 106394402 8055547 102581312 102620774 107821632 107762805
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