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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106454494   RING-H2 finger protein ATL40 
 bna-r.1   106454493   RING-H2 finger protein ATL40 
 bra-r.6   103865942   RING-H2 finger protein ATL40 
 bra-r.6   103866627   RING-H2 finger protein ATL40 
 ath-u.5   AT2G42350   RING/U-box superfamily protein 
 ghi-r.1   107924965   E3 ubiquitin-protein ligase ATL41 
 ghi-r.1   107886690   E3 ubiquitin-protein ligase ATL41 
 cit-r.1   102615766   E3 ubiquitin-protein ligase ATL41-like 
 gma-u.5   100796057   RING-H2 finger protein ATL40 
 gma-u.5   100786701   E3 ubiquitin-protein ligase ATL41 
 vvi-u.5   100248798   RING-H2 finger protein ATL40 
 ppo-u.5   7494602   E3 ubiquitin-protein ligase ATL41 
 ppo-u.5   18109949   E3 ubiquitin-protein ligase ATL41 
 mtr-u.5   25487742   RING-H2 finger protein ATL40 
 sly-u.5   101259348   RING-H2 finger protein ATL40 
 sot-r.1   102592686   E3 ubiquitin-protein ligase ATL41-like 
 nta-r.1   107816843   RING-H2 finger protein ATL40 

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Top 50 coexpressed genes to 106454494 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106454494 (bna-r.1 coexpression data)

CoexMap"106395581"


bnaLOC106395581 | Entrez gene ID : 106395581    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta bdi osa tae zma cre sbi hvu
Paralog 2 2 1 2 1 2 1 2 1 1 1 1 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_013691447.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 2,  nucl 2,  E.R. 2,  cyto 1,  chlo_mito 1,  nucl_plas 1,  E.R._vacu 1,  E.R._plas 1  (predict for XP_013691447.1)
Subcellular
localization
TargetP
other 9  (predict for XP_013691447.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106454494
bna-r.1
for
106454493
bra-r.6
for
103865942
bra-r.6
for
103866627
ath-u.5
for
AT2G42350
ghi-r.1
for
107924965
ghi-r.1
for
107886690
cit-r.1
for
102615766
gma-u.5
for
100796057
gma-u.5
for
100786701
vvi-u.5
for
100248798
ppo-u.5
for
7494602
ppo-u.5
for
18109949
mtr-u.5
for
25487742
sly-u.5
for
101259348
sot-r.1
for
102592686
nta-r.1
for
107816843


Ortholog ID: 5712
Species bna bra bra bra ath ghi ghi cit gma vvi ppo ppo mtr sly sot nta nta
Symbol LOC106431561 LOC103865942 LOC103866627 LOC103866629 AT2G42350 LOC107924965 LOC107886690 LOC102615766 LOC100786701 LOC100248798 LOC7494602 LOC18109949 LOC25487742 LOC101259348 LOC102592686 LOC107816843 LOC107822736
Function* RING-H2 finger protein ATL40 RING-H2 finger protein ATL40 RING-H2 finger protein ATL40 E3 ubiquitin-protein ligase ATL41 RING/U-box superfamily protein E3 ubiquitin-protein ligase ATL41 E3 ubiquitin-protein ligase ATL41 E3 ubiquitin-protein ligase ATL41-like E3 ubiquitin-protein ligase ATL41 RING-H2 finger protein ATL40 E3 ubiquitin-protein ligase ATL41 E3 ubiquitin-protein ligase ATL41 RING-H2 finger protein ATL40 RING-H2 finger protein ATL40 E3 ubiquitin-protein ligase ATL41-like RING-H2 finger protein ATL40 RING-H2 finger protein ATL40
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04626 Plant-pathogen interaction 3
cit03040 Spliceosome 2
cit04141 Protein processing in endoplasmic reticulum 2
cit04144 Endocytosis 2
cit04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04626 Plant-pathogen interaction 4
ppo00480 Glutathione metabolism 4
ppo04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 3
sly04075 Plant hormone signal transduction 2
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00909 Sesquiterpenoid and triterpenoid biosynthesis 5
nta00480 Glutathione metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00909 Sesquiterpenoid and triterpenoid biosynthesis 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106431561 103865942 103866627 103866629 818836 107924965 107886690 102615766 100786701 100248798 7494602 18109949 25487742 101259348 102592686 107816843 107822736
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