ATTED-II : GeneCoexpression result

Species	Gene	Description
mtr-u.5	25487742	RING-H2 finger protein ATL40
mtr-r.5	25487742	RING-H2 finger protein ATL40
gma-u.5	100796057	RING-H2 finger protein ATL40
gma-u.5	100786701	E3 ubiquitin-protein ligase ATL41
ppo-u.5	7494602	E3 ubiquitin-protein ligase ATL41
ppo-u.5	18109949	E3 ubiquitin-protein ligase ATL41
ath-u.5	AT2G42350	RING/U-box superfamily protein
vvi-u.5	100248798	RING-H2 finger protein ATL40
sly-u.5	101259348	RING-H2 finger protein ATL40

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_013465196.1 [sequence] [blastp]

Subcellular
localization
wolf

E.R. 2, nucl 1, golg 1, cysk_nucl 1, E.R._vacu 1, E.R._plas 1, cyto_E.R. 1

(predict for XP_013465196.1)

Subcellular
localization
TargetP

other 9

(predict for XP_013465196.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	mtr-u.5 for 25487742	mtr-r.5 for 25487742	gma-u.5 for 100796057	gma-u.5 for 100786701	ppo-u.5 for 7494602	ppo-u.5 for 18109949	ath-u.5 for AT2G42350	vvi-u.5 for 100248798	sly-u.5 for 101259348

Ortholog ID: 5712

Species

mtr

gma

ppo

ath

bra

vvi

ghi

cit

sly

sot

nta

Symbol

Function^*

RING-H2 finger protein ATL40

E3 ubiquitin-protein ligase ATL41

RING/U-box superfamily protein

RING-H2 finger protein ATL40

E3 ubiquitin-protein ligase ATL41

RING-H2 finger protein ATL40

E3 ubiquitin-protein ligase ATL41

E3 ubiquitin-protein ligase ATL41-like

RING-H2 finger protein ATL40

E3 ubiquitin-protein ligase ATL41-like

RING-H2 finger protein ATL40

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04626	Plant-pathogen interaction	4
ppo00480	Glutathione metabolism	4
ppo04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04626	Plant-pathogen interaction	3
cit03040	Spliceosome	2
cit04141	Protein processing in endoplasmic reticulum	2
cit04144	Endocytosis	2
cit04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04016	MAPK signaling pathway - plant	3
sly04075	Plant hormone signal transduction	2
sly04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00909	Sesquiterpenoid and triterpenoid biosynthesis	5
nta00480	Glutathione metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00909	Sesquiterpenoid and triterpenoid biosynthesis	5

Expression

Expression pattern

Entrez Gene ID^*

25487742

100786701

7494602

18109949

818836

103866627

103866629

100248798

107886690

107924965

102615766

101259348

102592686

107816843

107822736

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 25487742 (mtr-u.5 coexpression data)

Top 50 enrichment test to 25487742 (mtr-u.5 coexpression data)


Species	mtr	gma	ppo	ath	vvi	sly	bdi	hvu	bra	cit	bna	sbi	ghi	osa	sot	nta	cre	tae	zma
Paralog	2	2	2	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 25487742 (mtr-u.5 coexpression data)

Top 50 enrichment test to 25487742 (mtr-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**