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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106396126   uncharacterized LOC106396126 
 bra-r.6   103872372   mediator of RNA polymerase II transcription subunit 15a 
 ath-u.5   AT1G15790   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ghi-r.1   107914148   mediator of RNA polymerase II transcription subunit 15a 
 ghi-r.1   107897283   mediator of RNA polymerase II transcription subunit 15a 
 cit-r.1   102617225   mediator of RNA polymerase II transcription subunit 15a 
 cit-r.1   102615750   mediator of RNA polymerase II transcription subunit 15a-like 
 gma-u.5   102660079   mediator of RNA polymerase II transcription subunit 15a 
 vvi-u.5   104877881   mediator of RNA polymerase II transcription subunit 15a 
 ppo-u.5   7480794   uncharacterized LOC7480794 
 mtr-u.5   11418696   mediator of RNA polymerase II transcription subunit 15a 
 mtr-u.5   11436839   mediator of RNA polymerase II transcription subunit 15a 
 mtr-u.5   120580296   uncharacterized LOC120580296 
 sly-u.5   101250919   mediator of RNA polymerase II transcription subunit 15a 
 sot-r.1   102604452   mediator of RNA polymerase II transcription subunit 15a-like 
 sot-r.1   102591617   uncharacterized LOC102591617 
 nta-r.1   107776844   uncharacterized LOC107776844 
 nta-r.1   107776212   uncharacterized LOC107776212 
 osa-u.5   4346081   mediator of RNA polymerase II transcription subunit 15a 
 tae-r.2   123191095   mediator of RNA polymerase II transcription subunit 15a 
 tae-r.2   123149933   uncharacterized LOC123149933 
 tae-r.2   123055266   uncharacterized LOC123055266 
 hvu-r.1   123395234   uncharacterized LOC123395234 
 hvu-r.1   123406175   mediator of RNA polymerase II transcription subunit 15a-like 
 hvu-r.1   123428455   uncharacterized LOC123428455 
 sbi-r.1   110436815   uncharacterized LOC110436815 
 sbi-r.1   8054819   mediator of RNA polymerase II transcription subunit 15a 

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Top 50 coexpressed genes to 106396126 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106396126 (bna-r.1 coexpression data)

CoexMap"106396127"


bnaLOC106396127 | Entrez gene ID : 106396127    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa tae hvu sbi bdi zma cre
Paralog 1 1 1 2 2 1 1 1 3 1 2 2 1 3 3 2 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (5322 genes)  IEA  
GO CC
GO MF
GO:0003713 [list] [network] transcription coactivator activity  (127 genes)  IEA  
GO:0031490 [list] [network] chromatin DNA binding  (130 genes)  IEA  
Protein XP_013691897.2 [sequence] [blastp]
XP_022558774.2 [sequence] [blastp]
Subcellular
localization
wolf
cysk 3,  nucl 2,  cyto 2,  cyto_nucl 2,  cysk_plas 2  (predict for XP_013691897.2)
cysk 3,  nucl 2,  cyto 2,  cyto_nucl 2,  cysk_plas 2  (predict for XP_022558774.2)
Subcellular
localization
TargetP
other 8  (predict for XP_013691897.2)
other 8  (predict for XP_022558774.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106396126
bra-r.6
for
103872372
ath-u.5
for
AT1G15790
ghi-r.1
for
107914148
ghi-r.1
for
107897283
cit-r.1
for
102617225
cit-r.1
for
102615750
gma-u.5
for
102660079
vvi-u.5
for
104877881
ppo-u.5
for
7480794
mtr-u.5
for
11418696
mtr-u.5
for
11436839
mtr-u.5
for
120580296
sly-u.5
for
101250919
sot-r.1
for
102604452
sot-r.1
for
102591617
nta-r.1
for
107776844
nta-r.1
for
107776212
osa-u.5
for
4346081
tae-r.2
for
123191095
tae-r.2
for
123149933
tae-r.2
for
123055266
hvu-r.1
for
123395234
hvu-r.1
for
123406175
hvu-r.1
for
123428455
sbi-r.1
for
110436815
sbi-r.1
for
8054819


Ortholog ID: 3275
Species bna bna bra ath ghi ghi cit cit gma vvi ppo ppo mtr mtr mtr sly sot sot nta nta osa tae tae tae hvu hvu hvu sbi sbi
Symbol LOC106346815 LOC106346813 LOC103872372 AT1G15790 LOC107914148 LOC107897283 LOC102617225 LOC102615750 LOC102660079 LOC104877881 LOC18096645 LOC18096666 LOC11418696 LOC11436839 LOC120580296 LOC101250919 LOC102604452 LOC102591617 LOC107776844 LOC107776212 LOC4346081 LOC123191095 LOC123149933 LOC123055266 LOC123395234 LOC123406175 LOC123428455 LOC110436815 LOC8054819
Function* mediator of RNA polymerase II transcription subunit 15a-like uncharacterized LOC106346813 mediator of RNA polymerase II transcription subunit 15a mediator of RNA polymerase II transcription subunit 15a-like protein mediator of RNA polymerase II transcription subunit 15a mediator of RNA polymerase II transcription subunit 15a mediator of RNA polymerase II transcription subunit 15a mediator of RNA polymerase II transcription subunit 15a-like mediator of RNA polymerase II transcription subunit 15a mediator of RNA polymerase II transcription subunit 15a mediator of RNA polymerase II transcription subunit 15a mediator of RNA polymerase II transcription subunit 15a mediator of RNA polymerase II transcription subunit 15a mediator of RNA polymerase II transcription subunit 15a uncharacterized LOC120580296 mediator of RNA polymerase II transcription subunit 15a mediator of RNA polymerase II transcription subunit 15a-like uncharacterized LOC102591617 uncharacterized LOC107776844 uncharacterized LOC107776212 mediator of RNA polymerase II transcription subunit 15a mediator of RNA polymerase II transcription subunit 15a uncharacterized LOC123149933 uncharacterized LOC123055266 uncharacterized LOC123395234 mediator of RNA polymerase II transcription subunit 15a-like uncharacterized LOC123428455 uncharacterized LOC110436815 mediator of RNA polymerase II transcription subunit 15a
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
ghi03040 Spliceosome 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
ghi03040 Spliceosome 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03020 RNA polymerase 2
cit03420 Nucleotide excision repair 2
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00010 Glycolysis / Gluconeogenesis 2
vvi00040 Pentose and glucuronate interconversions 2
vvi00053 Ascorbate and aldarate metabolism 2
vvi00561 Glycerolipid metabolism 2
vvi00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 4
mtr04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 4
nta04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 3
nta04141 Protein processing in endoplasmic reticulum 3
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04146 Peroxisome 3
hvu00280 Valine, leucine and isoleucine degradation 3
hvu00640 Propanoate metabolism 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi03250 Viral life cycle - HIV-1 2
sbi03272 Virion - Hepatitis viruses 2
sbi04144 Endocytosis 2
sbi03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106346815 106346813 103872372 838148 107914148 107897283 102617225 102615750 102660079 104877881 18096645 18096666 11418696 11436839 120580296 101250919 102604452 102591617 107776844 107776212 4346081 123191095 123149933 123055266 123395234 123406175 123428455 110436815 8054819
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