ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bna-r.1	106396684	chitin elicitor receptor kinase 1
bna-r.1	125594288	chitin elicitor receptor kinase 1-like
bna-r.1	106445994	chitin elicitor receptor kinase 1-like
bra-r.6	103869159	chitin elicitor receptor kinase 1
ath-u.5	CERK1	chitin elicitor receptor kinase 1
ghi-r.1	107925049	lysM domain receptor-like kinase 3
ghi-r.1	107935365	chitin elicitor receptor kinase 1
ghi-r.1	121219387	lysM domain receptor-like kinase 3
cit-r.1	102617134	lysM domain receptor-like kinase 3
cit-r.1	102617620	chitin elicitor receptor kinase 1-like
gma-u.5	100777781	lysM domain receptor-like kinase 3
gma-u.5	100802308	chitin elicitor receptor kinase 1
vvi-u.5	100255092	lysM domain receptor-like kinase 3
vvi-u.5	100262323	lysM domain receptor-like kinase 3
ppo-u.5	7489886	lysM domain receptor-like kinase 3
ppo-u.5	7462070	lysM domain receptor-like kinase 3
mtr-u.5	25486225	chitin elicitor receptor kinase 1
mtr-u.5	11432869	lysM domain receptor-like kinase 3
mtr-u.5	11442199	lysM domain receptor-like kinase 3
sly-u.5	Lyk11	LysM receptor-like kinase 11
sly-u.5	LYK12	LysM receptor-like kinase 12
sly-u.5	LYK1	LysM receptor-like kinase
sot-r.1	102600521	chitin elicitor receptor kinase 1-like
sot-r.1	102580181	chitin elicitor receptor kinase 1-like
sot-r.1	102580507	chitin elicitor receptor kinase 1-like
nta-r.1	107785015	lysM domain receptor-like kinase 3
nta-r.1	107762357	lysM domain receptor-like kinase 3
nta-r.1	107762365	lysM domain receptor-like kinase 3
osa-u.5	RLK10	lysM domain receptor-like kinase 10
osa-u.5	9267241	lysM domain receptor-like kinase 10
osa-u.5	4346173	chitin elicitor receptor kinase 1-like
zma-u.5	100281614	lysM receptor-like kinase
zma-u.5	100279924	uncharacterized LOC100279924
tae-r.2	123156803	chitin elicitor receptor kinase 1
tae-r.2	123142266	chitin elicitor receptor kinase 1
tae-r.2	123164992	chitin elicitor receptor kinase 1
hvu-r.1	123408894	chitin elicitor receptor kinase 1-like
hvu-r.1	123406006	chitin elicitor receptor kinase 1-like
sbi-r.1	8060585	chitin elicitor receptor kinase 1
sbi-r.1	8058983	chitin elicitor receptor kinase 1
bdi-r.1	100825025	chitin elicitor receptor kinase 1

Top 50 coexpressed genes to 106396684 (bna-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 106396684 (bna-r.1 coexpression data)

CoexMap"106396684"

[Cytoscape]

Annotation

functional annotation

KEGG

bna04626 [list] [network] Plant-pathogen interaction (721 genes)

GO BP

GO:0045087 [list] [network] innate immune response	(55 genes)	IEA
GO:0006468 [list] [network] protein phosphorylation	(3287 genes)	IEA

GO CC

GO MF

GO:0019199 [list] [network] transmembrane receptor protein kinase activity	(44 genes)	IEA
GO:0005524 [list] [network] ATP binding	(5995 genes)	IEA

Protein

XP_013692605.2 [sequence] [blastp]
XP_013692606.2 [sequence] [blastp]

Subcellular
localization
wolf

plas 9, vacu 1, E.R. 1, E.R._vacu 1	(predict for XP_013692605.2)
plas 9, vacu 1, E.R. 1, E.R._vacu 1	(predict for XP_013692606.2)

Subcellular
localization
TargetP

scret 9	(predict for XP_013692605.2)
scret 9	(predict for XP_013692606.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106396684	bna-r.1 for 125594288	bna-r.1 for 106445994	bra-r.6 for 103869159	ath-u.5 for CERK1	ghi-r.1 for 107925049	ghi-r.1 for 107935365	ghi-r.1 for 121219387	cit-r.1 for 102617134	cit-r.1 for 102617620	gma-u.5 for 100777781	gma-u.5 for 100802308	vvi-u.5 for 100255092	vvi-u.5 for 100262323	ppo-u.5 for 7489886	ppo-u.5 for 7462070	mtr-u.5 for 25486225	mtr-u.5 for 11432869	mtr-u.5 for 11442199	sly-u.5 for Lyk11	sly-u.5 for LYK12	sly-u.5 for LYK1	sot-r.1 for 102600521	sot-r.1 for 102580181	sot-r.1 for 102580507	nta-r.1 for 107785015	nta-r.1 for 107762357	nta-r.1 for 107762365	osa-u.5 for RLK10	osa-u.5 for 9267241	osa-u.5 for 4346173	zma-u.5 for 100281614	zma-u.5 for 100279924	tae-r.2 for 123156803	tae-r.2 for 123142266	tae-r.2 for 123164992	hvu-r.1 for 123408894	hvu-r.1 for 123406006	sbi-r.1 for 8060585	sbi-r.1 for 8058983	bdi-r.1 for 100825025

Ortholog

Ortholog ID: 2645

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

CERK1

Lyk11

LYK12

LYK1

RLK10

Function^*

chitin elicitor receptor kinase 1

chitin elicitor receptor kinase 1-like

chitin elicitor receptor kinase 1

lysM domain receptor-like kinase 3

chitin elicitor receptor kinase 1

lysM domain receptor-like kinase 3

chitin elicitor receptor kinase 1-like

lysM domain receptor-like kinase 3

chitin elicitor receptor kinase 1

lysM domain receptor-like kinase 3

LysM receptor-like kinase 11

LysM receptor-like kinase 12

LysM receptor-like kinase

chitin elicitor receptor kinase 1-like

lysM domain receptor-like kinase 3

chitin elicitor receptor kinase 1

lysM domain receptor-like kinase 10

chitin elicitor receptor kinase 1-like

lysM receptor-like kinase

uncharacterized LOC100279924

chitin elicitor receptor kinase 1

chitin elicitor receptor kinase 1-like

chitin elicitor receptor kinase 1

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04148	Efferocytosis	4
bna04626	Plant-pathogen interaction	3
bna03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04148	Efferocytosis	4
bna04626	Plant-pathogen interaction	3
bna03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04626	Plant-pathogen interaction	7
bna04016	MAPK signaling pathway - plant	4
bna04075	Plant hormone signal transduction	4
bna04148	Efferocytosis	4
bna03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04626	Plant-pathogen interaction	3
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00250	Alanine, aspartate and glutamate metabolism	3
ghi01230	Biosynthesis of amino acids	3
ghi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04626	Plant-pathogen interaction	3
ghi00520	Amino sugar and nucleotide sugar metabolism	2
ghi00790	Folate biosynthesis	2
ghi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04626	Plant-pathogen interaction	3
ghi00514	Other types of O-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00905	Brassinosteroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04144	Endocytosis	2
cit03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	6
gma04626	Plant-pathogen interaction	6
gma04016	MAPK signaling pathway - plant	2
gma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	2
gma03008	Ribosome biogenesis in eukaryotes	2
gma04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04626	Plant-pathogen interaction	4
vvi00514	Other types of O-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	5
mtr04626	Plant-pathogen interaction	5
mtr04016	MAPK signaling pathway - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01200	Carbon metabolism	4
mtr00620	Pyruvate metabolism	2
mtr00710	Carbon fixation by Calvin cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00920	Sulfur metabolism	3
sly01320	Sulfur cycle	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04626	Plant-pathogen interaction	2
sly01240	Biosynthesis of cofactors	2
sly00561	Glycerolipid metabolism	2
sly00564	Glycerophospholipid metabolism	2
sly04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04626	Plant-pathogen interaction	3
sot04016	MAPK signaling pathway - plant	2
sot01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03060	Protein export	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04626	Plant-pathogen interaction	4
nta00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03060	Protein export	4
nta00902	Monoterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04382	Cornified envelope formation	2
osa04148	Efferocytosis	2
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	6
zma04626	Plant-pathogen interaction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04626	Plant-pathogen interaction	4
tae00600	Sphingolipid metabolism	3
tae04382	Cornified envelope formation	3
tae03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00904	Diterpenoid biosynthesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04626	Plant-pathogen interaction	4
tae04075	Plant hormone signal transduction	3
tae03060	Protein export	3
tae00561	Glycerolipid metabolism	3
tae00564	Glycerophospholipid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04626	Plant-pathogen interaction	3
bdi04016	MAPK signaling pathway - plant	2

Expression

Expression pattern

Entrez Gene ID^*

106396684

125594288

106445994

103869159

821717

107925049

121219387

121232135

102617134

102617620

102622024

100777781

100802308

100255092

100262323

7489886

7462070

11442199

11429650

11432279

100736484

100736485

100736514

102600521

102580181

102580507

107785015

107783515

107801937

9270778

9267241

4346173

100281614

100279924

123156803

123142266

123164992

123408894

123406006

8060585

8058983

100825025

The preparation time of this page was 0.2 [sec].


Species	bna	bra	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	1	1	3	2	2	2	2	3	3	3	3	3	2	3	2	2	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 106396684 (bna-r.1 coexpression data)

Top 50 enrichment test to 106396684 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**