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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106397232   COP9 signalosome complex subunit 8-like 
 ath-u.5   COP9   COP9 signalosome, subunit CSN8 
 gma-u.5   100801424   COP9 signalosome complex subunit 8-like 
 gma-u.5   100500543   putative COP9 signalosome, subunit 8 
 vvi-u.5   100257267   COP9 signalosome complex subunit 8 
 ppo-u.5   112326838   COP9 signalosome complex subunit 8-like 
 ppo-u.5   7470529   COP9 signalosome complex subunit 8 
 mtr-u.5   11433860   COP9 signalosome complex subunit 8 
 sly-u.5   101263551   COP9 signalosome complex subunit 8 
 osa-u.5   4335854   COP9 signalosome complex subunit 8 
 zma-u.5   100273709   COP9 signalosome complex subunit 8 
 zma-u.5   100280950   uncharacterized LOC100280950 

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Top 50 coexpressed genes to 106397232 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106397232 (bna-r.1 coexpression data)

CoexMap"106397232"


bnaLOC106397232 | Entrez gene ID : 106397232    
Species bna ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae ghi
Paralog 1 1 2 1 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010387 [list] [network] COP9 signalosome assembly  (4 genes)  IEA  
GO:0000338 [list] [network] protein deneddylation  (17 genes)  IEA  
GO CC
GO:0008180 [list] [network] COP9 signalosome  (36 genes)  IEA  
GO MF
Protein XP_048594547.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 3,  chlo 2,  nucl_plas 2  (predict for XP_048594547.1)
Subcellular
localization
TargetP
other 8,  scret 7  (predict for XP_048594547.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106397232

.
ath-u.5
for
COP9

.
gma-u.5
for
100801424

.
gma-u.5
for
100500543

.
vvi-u.5
for
100257267

.
ppo-u.5
for
112326838

.
ppo-u.5
for
7470529

.
mtr-u.5
for
11433860

.
sly-u.5
for
101263551

.
osa-u.5
for
4335854

.
zma-u.5
for
100273709

.
zma-u.5
for
100280950

.


Ortholog ID: 7272
Species ath gma gma sly osa zma zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol COP9 LOC100500543 LOC100801424 LOC101263551 LOC4335854 LOC100273709 LOC100280950 LOC103863564 LOC103833790 LOC100257267 LOC112326838 LOC7470529 LOC11433860 LOC123045465 LOC123189210 LOC123426722 LOC107940975 LOC107933683 LOC106390816 LOC106397232 CHLRE_14g608850v5 LOC8073994 LOC102597751 LOC102623606 LOC100825058 LOC107768852 LOC107759613
Function* COP9 signalosome, subunit CSN8 putative COP9 signalosome, subunit 8 COP9 signalosome complex subunit 8-like COP9 signalosome complex subunit 8 COP9 signalosome complex subunit 8 COP9 signalosome complex subunit 8 uncharacterized LOC100280950 COP9 signalosome complex subunit 8 COP9 signalosome complex subunit 8 COP9 signalosome complex subunit 8 COP9 signalosome complex subunit 8-like COP9 signalosome complex subunit 8 COP9 signalosome complex subunit 8 COP9 signalosome complex subunit 8 COP9 signalosome complex subunit 8 COP9 signalosome complex subunit 8 COP9 signalosome complex subunit 8 COP9 signalosome complex subunit 8 COP9 signalosome complex subunit 8 COP9 signalosome complex subunit 8-like uncharacterized protein COP9 signalosome complex subunit 8 COP9 signalosome complex subunit 8 COP9 signalosome complex subunit 8 COP9 signalosome complex subunit 8 COP9 signalosome complex subunit 8-like COP9 signalosome complex subunit 8
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath03018 RNA degradation 3
ath04120 Ubiquitin mediated proteolysis 2
ath04141 Protein processing in endoplasmic reticulum 2
ath03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 8
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 5
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 6
zma04141 Protein processing in endoplasmic reticulum 3
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
bra03013 Nucleocytoplasmic transport 3
bra03050 Proteasome 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
tae03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 3
tae03020 RNA polymerase 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 3
bna00760 Nicotinate and nicotinamide metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 8
sbi00510 N-Glycan biosynthesis 2
sbi00513 Various types of N-glycan biosynthesis 2
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 3
sot04120 Ubiquitin mediated proteolysis 2
sot03015 mRNA surveillance pathway 2
sot03008 Ribosome biogenesis in eukaryotes 2
sot03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 7
bdi03040 Spliceosome 7
bdi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 9
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827049 100500543 100801424 101263551 4335854 100273709 100280950 103863564 103833790 100257267 112326838 7470529 11433860 123045465 123189210 123426722 107940975 107933683 106390816 106397232 66056138 8073994 102597751 102623606 100825058 107768852 107759613
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