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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1  106399073  exopolygalacturonase clone GBGA483-like 
 ath-u.5  AT3G14040  Pectin lyase-like superfamily protein 
 ath-u.5  AT5G48140  Pectin lyase-like superfamily protein 
 gma-u.5  100810484  exopolygalacturonase 
 vvi-u.5  100265436  exopolygalacturonase 
 mtr-u.5  25488062  exopolygalacturonase 
 sly-u.5  101249539  polygalacturonase-like 
 osa-u.5  4341515  exopolygalacturonase 
 osa-u.5  4323970  exopolygalacturonase 
 osa-u.5  4328617  exopolygalacturonase 
 zma-u.5  103626843  exopolygalacturonase-like 
 zma-u.5  100273946  uncharacterized LOC100273946 

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Top 50 coexpressed genes to 106399073 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106399073 (bna-r.1 coexpression data)

CoexMap"106399073"


bnaLOC106399073 | Entrez gene ID : 106399073
Species bna ath gma vvi mtr sly osa zma bdi hvu bra cit ppo sbi ghi sot nta cre tae
Paralog 1 2 1 1 1 1 3 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna00040 [list] [network] Pentose and glucuronate interconversions (366 genes)
GO BP
GO:0005975 [list] [network] carbohydrate metabolic process  (2192 genes)  IEA  
GO CC
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (211 genes)  IEA  
Protein XP_022558763.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  cysk 2,  cyto_pero 2,  cyto_E.R. 2  (predict for XP_022558763.1)
Subcellular
localization
TargetP
other 6  (predict for XP_022558763.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

bna-r.1
for
106399073


ath-u.5
for
AT3G14040


ath-u.5
for
AT5G48140


gma-u.5
for
100810484


vvi-u.5
for
100265436


mtr-u.5
for
25488062


sly-u.5
for
101249539


osa-u.5
for
4341515


osa-u.5
for
4323970


osa-u.5
for
4328617


zma-u.5
for
103626843


zma-u.5
for
100273946



Ortholog ID: 84
Species bna ath ghi gma sly nta nta osa zma zma tae tae
Symbol LOC106388994 AT3G07820 LOC121221131 LOC100779556 LOC101249539 LOC107769351 LOC107822352 LOC4341515 LOC100273946 LOC118472225 LOC123168013 LOC123144207
Function* polygalacturonase-like Pectin lyase-like superfamily protein polygalacturonase-like polygalacturonase polygalacturonase-like polygalacturonase-like exopolygalacturonase clone GBGE184-like exopolygalacturonase uncharacterized LOC100273946 exopolygalacturonase exopolygalacturonase exopolygalacturonase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00040 Pentose and glucuronate interconversions 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00040 Pentose and glucuronate interconversions 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00040 Pentose and glucuronate interconversions 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00040 Pentose and glucuronate interconversions 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 2
nta00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 8
nta00740 Riboflavin metabolism 2
nta04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00040 Pentose and glucuronate interconversions 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00040 Pentose and glucuronate interconversions 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00040 Pentose and glucuronate interconversions 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00040 Pentose and glucuronate interconversions 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00040 Pentose and glucuronate interconversions 3
tae00940 Phenylpropanoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106388994 819973 121221131 100779556 101249539 107769351 107822352 4341515 100273946 118472225 123168013 123144207
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