ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-u.5	AT4G33940	RING/U-box superfamily protein
sly-u.5	101249497	RING finger protein
sly-u.5	101249963	uncharacterized LOC101249963

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0061630 [list] [network] ubiquitin protein ligase activity

(605 genes)

IEA

Protein

XP_013695416.1 [sequence] [blastp]

Subcellular
localization
wolf

mito 4, chlo_mito 4, chlo 4

(predict for XP_013695416.1)

Subcellular
localization
TargetP

mito 9

(predict for XP_013695416.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for AT4G33940	sly-u.5 for 101249497	sly-u.5 for 101249963

Ortholog ID: 11719

Species

bna

bra

ath

ghi

sly

sot

nta

Symbol

Function^*

E3 ubiquitin-protein ligase RNF170

E3 ubiquitin-protein ligase RNF170-like

E3 ubiquitin-protein ligase RNF170

RING/U-box superfamily protein

E3 ubiquitin-protein ligase RNF170

uncharacterized LOC101249963

RING finger protein

E3 ubiquitin-protein ligase RNF170-like

uncharacterized LOC107821068

uncharacterized LOC107765326

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	2
bra04626	Plant-pathogen interaction	2
bra03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	4
ath04120	Ubiquitin mediated proteolysis	2
ath04141	Protein processing in endoplasmic reticulum	2
ath03272	Virion - Hepatitis viruses	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03082	ATP-dependent chromatin remodeling	2
ghi00561	Glycerolipid metabolism	2
ghi00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00500	Starch and sucrose metabolism	4
sot00051	Fructose and mannose metabolism	2
sot04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04016	MAPK signaling pathway - plant	7
nta04075	Plant hormone signal transduction	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	4
nta04016	MAPK signaling pathway - plant	2
nta04712	Circadian rhythm - plant	2

Expression

Expression pattern

Entrez Gene ID^*

106370861

106376004

103862307

103843481

829539

107943304

107894691

101249963

101249497

102602273

102601943

107821068

107765326


Species	ath	sly	bdi	bra	gma	ppo	sbi	ghi	sot	nta	cre	tae	zma	mtr	hvu	vvi	cit	bna	osa
Paralog	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to AT4G33940 (ath-u.5 coexpression data)

Top 50 enrichment test to AT4G33940 (ath-u.5 coexpression data)

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT4G33940 (ath-u.5 coexpression data)

Top 50 enrichment test to AT4G33940 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**