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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106346434   homologous-pairing protein 2 homolog 
 bra-r.6   103871941   homologous-pairing protein 2 homolog 
 ghi-r.1   107932390   homologous-pairing protein 2 homolog 
 ghi-r.1   107920456   homologous-pairing protein 2 homolog 
 gma-u.5   100813353   homologous-pairing protein 2 homolog 
 gma-u.5   100810135   homologous-pairing protein 2 homolog 
 ppo-u.5   7488346   homologous-pairing protein 2 homolog 
 mtr-u.5   11432620   homologous-pairing protein 2 homolog 
 sly-u.5   101258653   homologous-pairing protein 2 homolog 
 sot-r.1   102592078   homologous-pairing protein 2 homolog 
 nta-r.1   107809315   homologous-pairing protein 2 homolog 
 nta-r.1   107797815   homologous-pairing protein 2 homolog 
 osa-u.5   112936008   homologous-pairing protein 2 homolog 
 zma-u.5   103643888   homologous-pairing protein 2 homolog 
 zma-u.5   100282702   Homologous-pairing protein 2 homolog 
 tae-r.2   123087118   homologous-pairing protein 2 homolog 
 tae-r.2   123095855   homologous-pairing protein 2 homolog 
 tae-r.2   123090844   homologous-pairing protein 2 homolog 
 hvu-r.1   123447435   homologous-pairing protein 2 homolog 
 sbi-r.1   8062915   homologous-pairing protein 2 homolog 
 bdi-r.1   100838246   homologous-pairing protein 2 homolog 
 cre-r.1   CHLRE_06g284400v5   uncharacterized protein 

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Top 50 coexpressed genes to 106346434 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106346434 (bna-r.1 coexpression data)

CoexMap"106402288"


bnaLOC106402288 | Entrez gene ID : 106402288    
Species bna bra ghi gma ppo mtr sly sot nta osa zma tae hvu sbi bdi cre vvi cit ath
Paralog 1 1 2 2 1 1 1 1 2 1 2 3 1 1 1 1 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000709 [list] [network] meiotic joint molecule formation  (2 genes)  IEA  
GO:0010774 [list] [network] meiotic strand invasion involved in reciprocal meiotic recombination  (2 genes)  IEA  
GO:0007129 [list] [network] homologous chromosome pairing at meiosis  (30 genes)  IEA  
GO CC
GO:0120231 [list] [network] DNA recombinase auxiliary factor complex  (2 genes)  IEA  
GO:0000794 [list] [network] condensed nuclear chromosome  (39 genes)  IEA  
GO MF
GO:0120230 [list] [network] recombinase activator activity  (2 genes)  IEA  
GO:0003690 [list] [network] double-stranded DNA binding  (1590 genes)  IEA  
Protein XP_013698448.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for XP_013698448.1)
Subcellular
localization
TargetP
other 8  (predict for XP_013698448.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106346434
bra-r.6
for
103871941
ghi-r.1
for
107932390
ghi-r.1
for
107920456
gma-u.5
for
100813353
gma-u.5
for
100810135
ppo-u.5
for
7488346
mtr-u.5
for
11432620
sly-u.5
for
101258653
sot-r.1
for
102592078
nta-r.1
for
107809315
nta-r.1
for
107797815
osa-u.5
for
112936008
zma-u.5
for
103643888
zma-u.5
for
100282702
tae-r.2
for
123087118
tae-r.2
for
123095855
tae-r.2
for
123090844
hvu-r.1
for
123447435
sbi-r.1
for
8062915
bdi-r.1
for
100838246
cre-r.1
for
CHLRE_06g284400v5


Ortholog ID: 9774
Species bna bra ghi ghi gma gma ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC106346434 LOC103871941 LOC107932390 LOC107920456 LOC100813353 LOC100810135 LOC7488346 LOC11432620 LOC101258653 LOC102592078 LOC107809315 LOC107797815 LOC112936008 LOC103643888 LOC100282702 LOC123087118 LOC123095855 LOC123090844 LOC123447435 LOC8062915 LOC100838246 CHLRE_06g284400v5
Function* homologous-pairing protein 2 homolog homologous-pairing protein 2 homolog homologous-pairing protein 2 homolog homologous-pairing protein 2 homolog homologous-pairing protein 2 homolog homologous-pairing protein 2 homolog homologous-pairing protein 2 homolog homologous-pairing protein 2 homolog homologous-pairing protein 2 homolog homologous-pairing protein 2 homolog homologous-pairing protein 2 homolog homologous-pairing protein 2 homolog homologous-pairing protein 2 homolog homologous-pairing protein 2 homolog Homologous-pairing protein 2 homolog homologous-pairing protein 2 homolog homologous-pairing protein 2 homolog homologous-pairing protein 2 homolog homologous-pairing protein 2 homolog homologous-pairing protein 2 homolog homologous-pairing protein 2 homolog uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 4
bna00240 Pyrimidine metabolism 4
bna00480 Glutathione metabolism 4
bna01232 Nucleotide metabolism 4
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 4
ghi03430 Mismatch repair 4
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 4
ghi03430 Mismatch repair 4
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 7
gma00240 Pyrimidine metabolism 3
gma01232 Nucleotide metabolism 3
gma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 9
ppo03410 Base excision repair 3
ppo03420 Nucleotide excision repair 3
ppo00230 Purine metabolism 2
ppo00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 5
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 6
zma03410 Base excision repair 3
zma03420 Nucleotide excision repair 3
zma03430 Mismatch repair 3
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 6
tae03420 Nucleotide excision repair 2
tae03430 Mismatch repair 2
tae03440 Homologous recombination 2
tae03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 7
bdi03430 Mismatch repair 2
bdi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 2
cre03420 Nucleotide excision repair 2
cre03430 Mismatch repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106346434 103871941 107932390 107920456 100813353 100810135 7488346 11432620 101258653 102592078 107809315 107797815 112936008 103643888 100282702 123087118 123095855 123090844 123447435 8062915 100838246 5720979
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