ATTED-II : GeneCoexpression result

Species	Gene	Description
bna-r.1	106405544	uncharacterized LOC106405544
bna-r.1	111211093	uncharacterized LOC111211093
bna-r.1	106440212	uncharacterized LOC106440212
bna-r.1	106437849	uncharacterized LOC106437849
bra-r.6	103860948	uncharacterized LOC103860948
bra-r.6	103857564	uncharacterized LOC103857564
bra-r.6	103867377	uncharacterized LOC103867377
ath-u.5	AT2G35260	CAAX protease self-immunity protein
ath-u.5	AT4G17840	CAAX protease self-immunity protein
ghi-r.1	107918389	uncharacterized LOC107918389
ghi-r.1	107933592	uncharacterized LOC107933592
cit-r.1	102630012	hypothetical protein
gma-u.5	100818224	uncharacterized LOC100818224
gma-u.5	G	protein STAY-GREEN
vvi-u.5	100247252	uncharacterized LOC100247252
ppo-u.5	18094177	uncharacterized LOC18094177
mtr-u.5	11434435	uncharacterized LOC11434435
sly-u.5	G	protein STAY-GREEN
sot-r.1	102599907	uncharacterized LOC102599907
nta-r.1	107821626	uncharacterized LOC107821626
nta-r.1	107767045	uncharacterized LOC107767045
osa-u.5	107275868	uncharacterized LOC107275868
zma-u.5	100217228	uncharacterized LOC100217228
tae-r.2	123093991	uncharacterized LOC123093991
tae-r.2	123099186	uncharacterized LOC123099186
tae-r.2	123106150	uncharacterized LOC123106150
hvu-r.1	123450074	uncharacterized LOC123450074
sbi-r.1	8075930	uncharacterized LOC8075930
bdi-r.1	100822795	uncharacterized LOC100822795

Annotation

functional annotation

KEGG

GO BP

GO:0071586 [list] [network] CAAX-box protein processing

(29 genes)

IEA

GO CC

GO:0016020 [list] [network] membrane

(9970 genes)

IEA

GO MF

GO:0004222 [list] [network] metalloendopeptidase activity

(147 genes)

IEA

Protein

XP_013701519.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, nucl 1, cyto 1, cyto_nucl 1

(predict for XP_013701519.2)

Subcellular
localization
TargetP

chlo 9

(predict for XP_013701519.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106405544	bna-r.1 for 111211093	bna-r.1 for 106440212	bna-r.1 for 106437849	bra-r.6 for 103860948	bra-r.6 for 103857564	bra-r.6 for 103867377	ath-u.5 for AT2G35260	ath-u.5 for AT4G17840	ghi-r.1 for 107918389	ghi-r.1 for 107933592	cit-r.1 for 102630012	gma-u.5 for 100818224	gma-u.5 for G	vvi-u.5 for 100247252	ppo-u.5 for 18094177	mtr-u.5 for 11434435	sly-u.5 for G	sot-r.1 for 102599907	nta-r.1 for 107821626	nta-r.1 for 107767045	osa-u.5 for 107275868	zma-u.5 for 100217228	tae-r.2 for 123093991	tae-r.2 for 123099186	tae-r.2 for 123106150	hvu-r.1 for 123450074	sbi-r.1 for 8075930	bdi-r.1 for 100822795

Ortholog

Ortholog ID: 6829

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC111211093

uncharacterized LOC106440212

uncharacterized LOC106410249

uncharacterized LOC103860948

uncharacterized LOC103857564

uncharacterized LOC103867377

CAAX protease self-immunity protein

uncharacterized LOC107918389

uncharacterized LOC107933592

hypothetical protein

uncharacterized LOC100818224

protein STAY-GREEN

uncharacterized LOC100247252

uncharacterized LOC18094177

uncharacterized LOC11434435

protein STAY-GREEN

uncharacterized LOC102599907

uncharacterized LOC107821626

uncharacterized LOC107767045

uncharacterized LOC107275868

uncharacterized LOC100217228

uncharacterized LOC123093991

uncharacterized LOC123099186

uncharacterized LOC123106150

uncharacterized LOC123450074

uncharacterized LOC8075930

uncharacterized LOC100822795

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00860	Porphyrin metabolism	3
bra00195	Photosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00196	Photosynthesis - antenna proteins	5
bra00860	Porphyrin metabolism	4
bra00710	Carbon fixation by Calvin cycle	2
bra01200	Carbon metabolism	2
bra00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00860	Porphyrin metabolism	5
ath00196	Photosynthesis - antenna proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01240	Biosynthesis of cofactors	2
ath00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
ath00350	Tyrosine metabolism	2
ath00360	Phenylalanine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00904	Diterpenoid biosynthesis	2
ghi00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01200	Carbon metabolism	4
cit00630	Glyoxylate and dicarboxylate metabolism	3
cit00260	Glycine, serine and threonine metabolism	2
cit00670	One carbon pool by folate	2
cit00785	Lipoic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00195	Photosynthesis	10
gma00196	Photosynthesis - antenna proteins	4
gma00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00195	Photosynthesis	6
gma00196	Photosynthesis - antenna proteins	4
gma00860	Porphyrin metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00195	Photosynthesis	8
vvi00196	Photosynthesis - antenna proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00195	Photosynthesis	5
ppo00196	Photosynthesis - antenna proteins	2
ppo00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00195	Photosynthesis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00860	Porphyrin metabolism	6
sly01240	Biosynthesis of cofactors	2
sly00710	Carbon fixation by Calvin cycle	2
sly01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00860	Porphyrin metabolism	5
sot00900	Terpenoid backbone biosynthesis	2
sot00196	Photosynthesis - antenna proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta01240	Biosynthesis of cofactors	8
nta00860	Porphyrin metabolism	6
nta00130	Ubiquinone and other terpenoid-quinone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta01240	Biosynthesis of cofactors	8
nta00860	Porphyrin metabolism	6
nta00561	Glycerolipid metabolism	2
nta00564	Glycerophospholipid metabolism	2
nta00565	Ether lipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00860	Porphyrin metabolism	5
osa00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00010	Glycolysis / Gluconeogenesis	2
zma00030	Pentose phosphate pathway	2
zma00051	Fructose and mannose metabolism	2
zma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00196	Photosynthesis - antenna proteins	15
tae00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00196	Photosynthesis - antenna proteins	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00196	Photosynthesis - antenna proteins	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00195	Photosynthesis	3
hvu00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00196	Photosynthesis - antenna proteins	7
sbi00860	Porphyrin metabolism	3
sbi00710	Carbon fixation by Calvin cycle	2
sbi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00196	Photosynthesis - antenna proteins	8
bdi04712	Circadian rhythm - plant	2

Expression

Expression pattern

Entrez Gene ID^*

111211093

106440212

106410249

103860948

103857564

103867377

818093

827507

107918389

107933592

102630012

100818224

100787147

100247252

18094177

11434435

101260158

102599907

107821626

107767045

107275868

100217228

123093991

123099186

123106150

123450074

8075930

100822795

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 106405544 (bna-r.1 coexpression data)

Top 50 enrichment test to 106405544 (bna-r.1 coexpression data)


Species	bna	bra	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	2	2	1	2	1	1	1	1	1	2	1	1	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 106405544 (bna-r.1 coexpression data)

Top 50 enrichment test to 106405544 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**