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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106405693   magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic 
 ath-u.5   CRD1   dicarboxylate diiron protein, putative (Crd1) 
 gma-u.5   100805393   magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic 
 gma-u.5   100527925   putative ferritin-like diiron-carboxylate protein 
 vvi-u.5   100241461   magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic-like 
 ppo-u.5   7495664   magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic 
 mtr-u.5   11420139   magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic 
 sly-u.5   101257518   putative magnesium-protoporphyrin monomethyl ester cyclase 
 osa-u.5   4326901   magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic 
 zma-u.5   103650025   magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic 
 zma-u.5   103634652   magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic 

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Top 50 coexpressed genes to 106405693 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106405693 (bna-r.1 coexpression data)

CoexMap"106405693"


bnaLOC106405693 | Entrez gene ID : 106405693    
Species bna ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae ghi
Paralog 1 1 2 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna00860 [list] [network] Porphyrin metabolism (154 genes)
GO BP
GO:0015995 [list] [network] chlorophyll biosynthetic process  (41 genes)  IEA  
GO:0015979 [list] [network] photosynthesis  (408 genes)  IEA  
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (359 genes)  IEA  
GO MF
GO:0048529 [list] [network] magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity  (6 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (6718 genes)  IEA  
Protein XP_013701677.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1,  plas 1,  golg 1,  nucl_plas 1,  golg_plas 1  (predict for XP_013701677.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_013701677.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106405693

.
ath-u.5
for
CRD1

.
gma-u.5
for
100805393

.
gma-u.5
for
100527925

.
vvi-u.5
for
100241461

.
ppo-u.5
for
7495664

.
mtr-u.5
for
11420139

.
sly-u.5
for
101257518

.
osa-u.5
for
4326901

.
zma-u.5
for
103650025

.
zma-u.5
for
103634652

.


Ortholog ID: 7256
Species ath gma gma sly osa zma zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre cre sbi sot cit bdi nta nta
Symbol CRD1 LOC100805393 LOC100527925 LOC101257518 LOC4326901 LOC103634652 LOC103650025 LOC103830076 LOC103841596 LOC100241461 LOC7495664 LOC11420139 LOC100037649 LOC123078196 LOC123443540 LOC107922564 LOC107922571 LOC106368040 LOC111208747 CHLRE_07g346050v5 CHLRE_12g510050v5 LOC8074544 LOC102600334 LOC102612985 LOC100828682 LOC107786828 LOC107777980
Function* dicarboxylate diiron protein, putative (Crd1) magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic putative ferritin-like diiron-carboxylate protein putative magnesium-protoporphyrin monomethyl ester cyclase magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic-like magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic-like magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic-like uncharacterized protein uncharacterized protein magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00196 Photosynthesis - antenna proteins 9
ath00860 Porphyrin metabolism 4
ath00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 8
gma00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00196 Photosynthesis - antenna proteins 7
gma00860 Porphyrin metabolism 7
gma00195 Photosynthesis 3
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00196 Photosynthesis - antenna proteins 7
sly00860 Porphyrin metabolism 5
sly00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00860 Porphyrin metabolism 6
osa00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 8
zma00561 Glycerolipid metabolism 2
zma00900 Terpenoid backbone biosynthesis 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 7
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00196 Photosynthesis - antenna proteins 3
bra00195 Photosynthesis 3
bra00860 Porphyrin metabolism 3
bra00710 Carbon fixation by Calvin cycle 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00196 Photosynthesis - antenna proteins 4
bra00860 Porphyrin metabolism 4
bra01200 Carbon metabolism 3
bra00710 Carbon fixation by Calvin cycle 2
bra00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00860 Porphyrin metabolism 4
vvi00196 Photosynthesis - antenna proteins 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00196 Photosynthesis - antenna proteins 9
ppo00195 Photosynthesis 2
ppo00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00196 Photosynthesis - antenna proteins 6
mtr00195 Photosynthesis 4
mtr00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 8
tae00196 Photosynthesis - antenna proteins 6
tae00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00196 Photosynthesis - antenna proteins 8
tae00860 Porphyrin metabolism 5
tae00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00860 Porphyrin metabolism 6
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 6
ghi00195 Photosynthesis 4
ghi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 6
ghi00195 Photosynthesis 4
ghi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00860 Porphyrin metabolism 6
cre01240 Biosynthesis of cofactors 2
cre00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00860 Porphyrin metabolism 10
cre01240 Biosynthesis of cofactors 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00196 Photosynthesis - antenna proteins 7
sbi00195 Photosynthesis 3
sbi00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 7
sot00860 Porphyrin metabolism 5
sot00196 Photosynthesis - antenna proteins 3
sot00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00196 Photosynthesis - antenna proteins 8
cit00195 Photosynthesis 4
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00860 Porphyrin metabolism 6
bdi01240 Biosynthesis of cofactors 3
bdi00906 Carotenoid biosynthesis 2
bdi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 8
nta00196 Photosynthesis - antenna proteins 2
nta00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 8
nta00196 Photosynthesis - antenna proteins 2
nta00900 Terpenoid backbone biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824861 100805393 100527925 101257518 4326901 103634652 103650025 103830076 103841596 100241461 7495664 11420139 100037649 123078196 123443540 107922564 107922571 106368040 111208747 5718021 5716556 8074544 102600334 102612985 100828682 107786828 107777980
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