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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106405767   pre-mRNA-splicing factor 18 
 ath-u.5   AT1G03140   splicing factor Prp18 family protein 
 gma-u.5   100785799   pre-mRNA-splicing factor 18 
 gma-u.5   100798833   pre-mRNA-splicing factor 18 
 vvi-u.5   100247737   uncharacterized LOC100247737 
 ppo-u.5   7464681   uncharacterized LOC7464681 
 mtr-u.5   25499124   pre-mRNA-splicing factor 18 
 sly-u.5   101257403   uncharacterized LOC101257403 
 osa-u.5   4343671   pre-mRNA-splicing factor 18 
 osa-u.5   4333826   uncharacterized LOC4333826 
 zma-u.5   103642837   pre-mRNA-splicing factor 18 
 zma-u.5   103633324   pre-mRNA-splicing factor 18-like 

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Top 50 coexpressed genes to 106405767 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106405767 (bna-r.1 coexpression data)

CoexMap"106405767"


bnaLOC106405767 | Entrez gene ID : 106405767    
Species bna ath gma vvi ppo mtr sly osa zma sot hvu tae cit sbi ghi cre nta bdi bra
Paralog 1 1 2 1 1 1 1 2 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03040 [list] [network] Spliceosome (912 genes)
GO BP
GO:0000350 [list] [network] generation of catalytic spliceosome for second transesterification step  (7 genes)  IEA  
GO:0008380 [list] [network] RNA splicing  (629 genes)  IEA  
GO CC
GO:0071021 [list] [network] U2-type post-spliceosomal complex  (4 genes)  IEA  
GO:0005682 [list] [network] U5 snRNP  (56 genes)  IEA  
GO:0046540 [list] [network] U4/U6 x U5 tri-snRNP complex  (91 genes)  IEA  
GO MF
Protein XP_013701761.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 4  (predict for XP_013701761.2)
Subcellular
localization
TargetP
other 8  (predict for XP_013701761.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106405767

.
ath-u.5
for
AT1G03140

.
gma-u.5
for
100785799

.
gma-u.5
for
100798833

.
vvi-u.5
for
100247737

.
ppo-u.5
for
7464681

.
mtr-u.5
for
25499124

.
sly-u.5
for
101257403

.
osa-u.5
for
4343671

.
osa-u.5
for
4333826

.
zma-u.5
for
103642837

.
zma-u.5
for
103633324

.


Ortholog ID: 3521
Species ath gma gma sly osa osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sbi sot sot cit bdi bdi nta nta
Symbol AT1G03140 LOC100798833 LOC100785799 LOC101257403 LOC4333826 LOC4343671 LOC118473525 LOC103843705 LOC103836632 LOC100247737 LOC7464681 LOC25499124 LOC123094312 LOC123099432 LOC123425621 LOC121219915 LOC107951791 LOC125578254 LOC106400595 CHLRE_13g567750v5 LOC8063417 LOC8083903 LOC107058193 LOC102588693 LOC102611778 LOC100827350 LOC100841185 LOC107819290 LOC107760550
Function* splicing factor Prp18 family protein pre-mRNA-splicing factor 18 pre-mRNA-splicing factor 18 uncharacterized LOC101257403 uncharacterized LOC4333826 pre-mRNA-splicing factor 18 pre-mRNA-splicing factor 18-like pre-mRNA-splicing factor 18 pre-mRNA-splicing factor 18 uncharacterized LOC100247737 uncharacterized LOC7464681 pre-mRNA-splicing factor 18 pre-mRNA-splicing factor 18 pre-mRNA-splicing factor 18-like pre-mRNA-splicing factor 18 pre-mRNA-splicing factor 18 pre-mRNA-splicing factor 18 pre-mRNA-splicing factor 18-like pre-mRNA-splicing factor 18-like uncharacterized protein pre-mRNA-splicing factor 18 pre-mRNA-splicing factor 18 pre-mRNA-splicing factor 18-like pre-mRNA-splicing factor 18 uncharacterized LOC102611778 pre-mRNA-splicing factor 18 pre-mRNA-splicing factor 18 uncharacterized LOC107819290 uncharacterized LOC107760550
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
sly04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 10
osa03040 Spliceosome 3
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 6
zma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo00020 Citrate cycle (TCA cycle) 2
ppo01200 Carbon metabolism 2
ppo01210 2-Oxocarboxylic acid metabolism 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 17
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 18
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 3
bna04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 2
cre03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 7
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 10
bdi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 2
nta04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839567 100798833 100785799 101257403 4333826 4343671 118473525 103843705 103836632 100247737 7464681 25499124 123094312 123099432 123425621 121219915 107951791 125578254 106400595 5719078 8063417 8083903 107058193 102588693 102611778 100827350 100841185 107819290 107760550
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