ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bna-r.1	106405844	eIF5-mimic protein 2-A-like
bna-r.1	125594267	eIF5-mimic protein 1-like
bna-r.1	106410976	eIF5-mimic protein 2-A
bna-r.1	106451546	eIF5-mimic protein 1
bra-r.6	103852222	basic leucine zipper and W2 domain-containing protein 1-A
bra-r.6	103868306	basic leucine zipper and W2 domain-containing protein 2
ath-u.5	AT5G36230	ARM repeat superfamily protein
ath-u.5	AT1G65220	ARM repeat superfamily protein
ghi-r.1	121229670	basic leucine zipper and W2 domain-containing protein 2
ghi-r.1	107959401	basic leucine zipper and W2 domain-containing protein 2
ghi-r.1	107928359	basic leucine zipper and W2 domain-containing protein 2
cit-r.1	102625173	uncharacterized LOC102625173
gma-u.5	100782537	basic leucine zipper and W2 domain-containing protein 2
gma-u.5	100789838	basic leucine zipper and W2 domain-containing protein 2-like
vvi-u.5	100259803	uncharacterized LOC100259803
ppo-u.5	7459220	uncharacterized LOC7459220
ppo-u.5	18104231	uncharacterized LOC18104231
mtr-u.5	11409694	basic leucine zipper and W2 domain-containing protein 2
sly-u.5	101260819	uncharacterized LOC101260819
sot-r.1	102594760	basic leucine zipper and W2 domain-containing protein 2-like
nta-r.1	107821724	uncharacterized LOC107821724
nta-r.1	107762222	uncharacterized LOC107762222
nta-r.1	107828816	uncharacterized LOC107828816
osa-u.5	4350359	uncharacterized LOC4350359
zma-u.5	100194261	eukaryotic initiation factor 5C CG2922-PF
zma-u.5	100284266	uncharacterized LOC100284266
tae-r.2	123086073	protein krasavietz
tae-r.2	123097408	protein krasavietz
tae-r.2	123092157	protein krasavietz
hvu-r.1	123448459	basic leucine zipper and W2 domain-containing protein 2-like
bdi-r.1	100829539	protein krasavietz
cre-r.1	CHLRE_06g298350v5	uncharacterized protein

Top 50 coexpressed genes to 106405844 (bna-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 106405844 (bna-r.1 coexpression data)

CoexMap"106405844"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0016020 [list] [network] membrane	(9970 genes)	IEA
GO:0005737 [list] [network] cytoplasm	(16489 genes)	IEA

GO MF

GO:0005515 [list] [network] protein binding

(12789 genes)

IEA

Protein

XP_013701848.2 [sequence] [blastp]

Subcellular
localization
wolf

cyto 6, nucl 2, chlo 1, mito 1, plas 1, chlo_mito 1, mito_plas 1

(predict for XP_013701848.2)

Subcellular
localization
TargetP

mito 5, other 5

(predict for XP_013701848.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106405844	bna-r.1 for 125594267	bna-r.1 for 106410976	bna-r.1 for 106451546	bra-r.6 for 103852222	bra-r.6 for 103868306	ath-u.5 for AT5G36230	ath-u.5 for AT1G65220	ghi-r.1 for 121229670	ghi-r.1 for 107959401	ghi-r.1 for 107928359	cit-r.1 for 102625173	gma-u.5 for 100782537	gma-u.5 for 100789838	vvi-u.5 for 100259803	ppo-u.5 for 7459220	ppo-u.5 for 18104231	mtr-u.5 for 11409694	sly-u.5 for 101260819	sot-r.1 for 102594760	nta-r.1 for 107821724	nta-r.1 for 107762222	nta-r.1 for 107828816	osa-u.5 for 4350359	zma-u.5 for 100194261	zma-u.5 for 100284266	tae-r.2 for 123086073	tae-r.2 for 123097408	tae-r.2 for 123092157	hvu-r.1 for 123448459	bdi-r.1 for 100829539	cre-r.1 for CHLRE_06g298350v5

Ortholog

Ortholog ID: 6093

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

bdi

cre

Symbol

Function^*

eIF5-mimic protein 1-like

eIF5-mimic protein 1

basic leucine zipper and W2 domain-containing protein 1-A

basic leucine zipper and W2 domain-containing protein 2

ARM repeat superfamily protein

basic leucine zipper and W2 domain-containing protein 2

uncharacterized LOC102625173

basic leucine zipper and W2 domain-containing protein 2

basic leucine zipper and W2 domain-containing protein 2-like

uncharacterized LOC100259803

uncharacterized LOC7459220

uncharacterized LOC18104231

basic leucine zipper and W2 domain-containing protein 2

uncharacterized LOC101260819

basic leucine zipper and W2 domain-containing protein 2-like

uncharacterized LOC107762222

uncharacterized LOC107828816

uncharacterized LOC107797584

uncharacterized LOC4350359

eukaryotic initiation factor 5C CG2922-PF

uncharacterized LOC100284266

protein krasavietz

basic leucine zipper and W2 domain-containing protein 2-like

protein krasavietz

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03050	Proteasome	5
bra03015	mRNA surveillance pathway	3
bra03040	Spliceosome	2
bra04136	Autophagy - other	2
bra04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04016	MAPK signaling pathway - plant	4
bra03015	mRNA surveillance pathway	2
bra04075	Plant hormone signal transduction	2
bra00564	Glycerophospholipid metabolism	2
bra00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	3
ath00510	N-Glycan biosynthesis	2
ath00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03018	RNA degradation	2
ath03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03018	RNA degradation	2
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03060	Protein export	2
ghi03018	RNA degradation	2
ghi03040	Spliceosome	2
ghi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03018	RNA degradation	2
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03050	Proteasome	6
cit04141	Protein processing in endoplasmic reticulum	2
cit04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03050	Proteasome	8
gma03250	Viral life cycle - HIV-1	2
gma03272	Virion - Hepatitis viruses	2
gma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03050	Proteasome	2
gma03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04120	Ubiquitin mediated proteolysis	2
vvi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03050	Proteasome	2
ppo03015	mRNA surveillance pathway	2
ppo04136	Autophagy - other	2
ppo04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03050	Proteasome	6
mtr03083	Polycomb repressive complex	2
mtr04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03050	Proteasome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03050	Proteasome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03050	Proteasome	6
zma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00970	Aminoacyl-tRNA biosynthesis	4
zma03015	mRNA surveillance pathway	2
zma03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03015	mRNA surveillance pathway	8
tae03018	RNA degradation	3
tae04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03015	mRNA surveillance pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03015	mRNA surveillance pathway	6
tae00010	Glycolysis / Gluconeogenesis	3
tae04382	Cornified envelope formation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03050	Proteasome	4
bdi03015	mRNA surveillance pathway	4
bdi03018	RNA degradation	2
bdi04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00970	Aminoacyl-tRNA biosynthesis	4

Expression

Expression pattern

Entrez Gene ID^*

125594267

106451546

106437979

103852222

103868306

833620

842829

121229670

107959401

107928359

102625173

100782537

100789838

100259803

7459220

18104231

11409694

101260819

102594760

107762222

107828816

107797584

4350359

100194261

100284266

123086073

123097408

123092157

123448459

100829539

5717018

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Species	bna	bra	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	bdi	cre	sbi
Paralog	4	2	2	3	1	2	1	2	1	1	1	3	1	2	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 106405844 (bna-r.1 coexpression data)

Top 50 enrichment test to 106405844 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**