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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106406035   putative nuclear RNA export factor SDE5 
 bna-r.1   111205752   putative nuclear RNA export factor SDE5 
 bna-r.1   106401143   putative nuclear RNA export factor SDE5 
 bna-r.1   106380693   putative nuclear RNA export factor SDE5 
 bra-r.6   103869924   putative nuclear RNA export factor SDE5 
 bra-r.6   103840780   putative nuclear RNA export factor SDE5 
 ath-u.5   SDE5   silencing defective 5 
 ghi-r.1   107891784   putative nuclear RNA export factor SDE5 
 ghi-r.1   107889004   putative nuclear RNA export factor SDE5 
 ghi-r.1   107917772   putative nuclear RNA export factor SDE5 
 cit-r.1   102619138   putative nuclear RNA export factor SDE5 
 gma-u.5   100808122   putative nuclear RNA export factor SDE5 
 vvi-u.5   100258824   putative nuclear RNA export factor SDE5 
 ppo-u.5   18103011   putative nuclear RNA export factor SDE5 
 ppo-u.5   7477411   putative nuclear RNA export factor SDE5 
 mtr-u.5   11421978   putative nuclear RNA export factor SDE5 
 sly-u.5   101252606   uncharacterized LOC101252606 
 sot-r.1   102578212   putative nuclear RNA export factor SDE5 
 nta-r.1   107803657   putative nuclear RNA export factor SDE5 
 nta-r.1   107804772   putative nuclear RNA export factor SDE5 
 osa-u.5   4330105   putative nuclear RNA export factor SDE5 
 zma-u.5   100192866   uncharacterized LOC100192866 
 tae-r.2   123046421   putative nuclear RNA export factor SDE5 
 tae-r.2   123054262   putative nuclear RNA export factor SDE5 
 hvu-r.1   123427583   putative nuclear RNA export factor SDE5 
 sbi-r.1   8074808   putative nuclear RNA export factor SDE5 
 bdi-r.1   100828496   putative nuclear RNA export factor SDE5 

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Top 50 coexpressed genes to 106406035 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106406035 (bna-r.1 coexpression data)

CoexMap"106406035"


bnaLOC106406035 | Entrez gene ID : 106406035    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 1 3 1 1 1 2 1 1 1 2 1 1 2 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_013702071.2 [sequence] [blastp]
XP_013702072.2 [sequence] [blastp]
XP_013702074.2 [sequence] [blastp]
XP_013702075.2 [sequence] [blastp]
XP_013702076.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  chlo 1,  cyto 1  (predict for XP_013702071.2)
nucl 9,  chlo 1,  cyto 1  (predict for XP_013702072.2)
nucl 9,  chlo 1,  cyto 1  (predict for XP_013702074.2)
nucl 9,  chlo 1,  cyto 1  (predict for XP_013702075.2)
nucl 9,  chlo 1,  cyto 1  (predict for XP_013702076.2)
Subcellular
localization
TargetP
other 7  (predict for XP_013702071.2)
other 7  (predict for XP_013702072.2)
other 7  (predict for XP_013702074.2)
other 7  (predict for XP_013702075.2)
other 7  (predict for XP_013702076.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106406035
bna-r.1
for
111205752
bna-r.1
for
106401143
bna-r.1
for
106380693
bra-r.6
for
103869924
bra-r.6
for
103840780
ath-u.5
for
SDE5
ghi-r.1
for
107891784
ghi-r.1
for
107889004
ghi-r.1
for
107917772
cit-r.1
for
102619138
gma-u.5
for
100808122
vvi-u.5
for
100258824
ppo-u.5
for
18103011
ppo-u.5
for
7477411
mtr-u.5
for
11421978
sly-u.5
for
101252606
sot-r.1
for
102578212
nta-r.1
for
107803657
nta-r.1
for
107804772
osa-u.5
for
4330105
zma-u.5
for
100192866
tae-r.2
for
123046421
tae-r.2
for
123054262
hvu-r.1
for
123427583
sbi-r.1
for
8074808
bdi-r.1
for
100828496


Ortholog ID: 5299
Species bna bna bna bra bra ath ghi ghi ghi cit gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC106406035 LOC111205752 LOC106401143 LOC103869924 LOC103840780 SDE5 LOC107891784 LOC107925259 LOC107916854 LOC102619138 LOC100808122 LOC100258824 LOC18103011 LOC7477411 LOC11421978 LOC101252606 LOC102578212 LOC107803657 LOC107804772 LOC4330105 LOC100192866 LOC123046421 LOC123054262 LOC123190156 LOC123427583 LOC8074808 LOC100828496
Function* putative nuclear RNA export factor SDE5 putative nuclear RNA export factor SDE5 putative nuclear RNA export factor SDE5 putative nuclear RNA export factor SDE5 putative nuclear RNA export factor SDE5 silencing defective 5 putative nuclear RNA export factor SDE5 putative nuclear RNA export factor SDE5 putative nuclear RNA export factor SDE5 putative nuclear RNA export factor SDE5 putative nuclear RNA export factor SDE5 putative nuclear RNA export factor SDE5 putative nuclear RNA export factor SDE5 putative nuclear RNA export factor SDE5 putative nuclear RNA export factor SDE5 uncharacterized LOC101252606 putative nuclear RNA export factor SDE5 putative nuclear RNA export factor SDE5 putative nuclear RNA export factor SDE5 putative nuclear RNA export factor SDE5 uncharacterized LOC100192866 putative nuclear RNA export factor SDE5 putative nuclear RNA export factor SDE5 putative nuclear RNA export factor SDE5 putative nuclear RNA export factor SDE5 putative nuclear RNA export factor SDE5 putative nuclear RNA export factor SDE5
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00562 Inositol phosphate metabolism 2
bra04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04082 Neuroactive ligand signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00460 Cyanoamino acid metabolism 2
nta00500 Starch and sucrose metabolism 2
nta00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 3
zma04141 Protein processing in endoplasmic reticulum 2
zma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
tae03015 mRNA surveillance pathway 4
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
tae03040 Spliceosome 3
tae03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03410 Base excision repair 4
bdi03030 DNA replication 3
bdi03420 Nucleotide excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106406035 111205752 106401143 103869924 103840780 820778 107891784 107925259 107916854 102619138 100808122 100258824 18103011 7477411 11421978 101252606 102578212 107803657 107804772 4330105 100192866 123046421 123054262 123190156 123427583 8074808 100828496
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