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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106408423   rRNA-processing protein EFG1-like 
 bna-r.1   106381574   rRNA-processing protein EFG1-like 
 bna-r.1   106411274   rRNA-processing protein EFG1 
 bna-r.1   111213040   rRNA-processing protein EFG1 
 bra-r.6   103848827   rRNA-processing protein EFG1 
 bra-r.6   103827960   rRNA-processing protein EFG1 
 ath-u.5   AT5G43720   rRNA-processing EFG1-like protein (DUF2361) 
 ath-u.5   AT1G04230   rRNA-processing EFG1-like protein (DUF2361) 
 ghi-r.1   107915024   rRNA-processing protein EFG1 
 ghi-r.1   107888890   rRNA-processing protein EFG1 
 ghi-r.1   107902774   uncharacterized LOC107902774 
 cit-r.1   102612014   rRNA-processing protein EFG1 
 gma-u.5   100811305   rRNA-processing protein EFG1 
 gma-u.5   100784700   rRNA-processing protein EFG1 
 vvi-u.5   100249350   rRNA-processing protein EFG1 
 ppo-u.5   18101579   rRNA-processing protein EFG1 
 ppo-u.5   7474162   rRNA-processing protein EFG1 
 mtr-u.5   25484460   rRNA-processing protein efg1 
 sly-u.5   101268030   rRNA-processing protein EFG1 
 sot-r.1   102592527   rRNA-processing protein EFG1 
 nta-r.1   107830066   uncharacterized LOC107830066 
 nta-r.1   107789099   uncharacterized LOC107789099 
 osa-u.5   4334430   rRNA-processing protein efg1 
 zma-u.5   100191329   uncharacterized LOC100191329 
 tae-r.2   123123219   rRNA-processing protein efg1 
 tae-r.2   123113692   rRNA-processing protein efg1 
 tae-r.2   123105423   rRNA-processing protein efg1 
 hvu-r.1   123452726   rRNA-processing protein efg1-like 
 sbi-r.1   8061166   rRNA-processing protein EFG1 
 bdi-r.1   100830238   rRNA-processing protein EFG1 
 cre-r.1   CHLRE_10g452600v5   uncharacterized protein 

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Top 50 coexpressed genes to 106408423 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106408423 (bna-r.1 coexpression data)

CoexMap"106408423"


bnaLOC106408423 | Entrez gene ID : 106408423    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 2 3 1 2 1 2 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000462 [list] [network] maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (142 genes)  IEA  
GO CC
GO:0030688 [list] [network] preribosome, small subunit precursor  (40 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (615 genes)  IEA  
GO MF
Protein XP_048615457.1 [sequence] [blastp]
XP_048615458.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_048615457.1)
nucl 9  (predict for XP_048615458.1)
Subcellular
localization
TargetP
chlo 4,  other 3,  mito 3  (predict for XP_048615457.1)
chlo 4,  other 3,  mito 3  (predict for XP_048615458.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106408423
bna-r.1
for
106381574
bna-r.1
for
106411274
bna-r.1
for
111213040
bra-r.6
for
103848827
bra-r.6
for
103827960
ath-u.5
for
AT5G43720
ath-u.5
for
AT1G04230
ghi-r.1
for
107915024
ghi-r.1
for
107888890
ghi-r.1
for
107902774
cit-r.1
for
102612014
gma-u.5
for
100811305
gma-u.5
for
100784700
vvi-u.5
for
100249350
ppo-u.5
for
18101579
ppo-u.5
for
7474162
mtr-u.5
for
25484460
sly-u.5
for
101268030
sot-r.1
for
102592527
nta-r.1
for
107830066
nta-r.1
for
107789099
osa-u.5
for
4334430
zma-u.5
for
100191329
tae-r.2
for
123123219
tae-r.2
for
123113692
tae-r.2
for
123105423
hvu-r.1
for
123452726
sbi-r.1
for
8061166
bdi-r.1
for
100830238
cre-r.1
for
CHLRE_10g452600v5


Ortholog ID: 6669
Species bna bna bna bra bra ath ath ghi ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC106408423 LOC106381574 LOC106411274 LOC103848827 LOC103827960 AT5G43720 AT1G04230 LOC107915024 LOC107902774 LOC107948913 LOC102612014 LOC100811305 LOC100784700 LOC100249350 LOC18101579 LOC7474162 LOC25484460 LOC101268030 LOC102592527 LOC107830066 LOC107789099 LOC4334430 LOC100191329 LOC123123219 LOC123113692 LOC123105423 LOC123452726 LOC8061166 LOC100830238 CHLRE_10g452600v5
Function* rRNA-processing protein EFG1-like rRNA-processing protein EFG1-like rRNA-processing protein EFG1 rRNA-processing protein EFG1 rRNA-processing protein EFG1 rRNA-processing EFG1-like protein (DUF2361) rRNA-processing EFG1-like protein (DUF2361) rRNA-processing protein EFG1 uncharacterized LOC107902774 rRNA-processing protein EFG1 rRNA-processing protein EFG1 rRNA-processing protein EFG1 rRNA-processing protein EFG1 rRNA-processing protein EFG1 rRNA-processing protein EFG1 rRNA-processing protein EFG1 rRNA-processing protein efg1 rRNA-processing protein EFG1 rRNA-processing protein EFG1 uncharacterized LOC107830066 uncharacterized LOC107789099 rRNA-processing protein efg1 uncharacterized LOC100191329 rRNA-processing protein efg1 rRNA-processing protein efg1 rRNA-processing protein efg1 rRNA-processing protein efg1-like rRNA-processing protein EFG1 rRNA-processing protein EFG1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 3
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 3
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 7
gma03013 Nucleocytoplasmic transport 5
gma03015 mRNA surveillance pathway 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
mtr03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 4
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta03420 Nucleotide excision repair 3
nta03030 DNA replication 2
nta03410 Base excision repair 2
nta03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 4
nta03030 DNA replication 2
nta03410 Base excision repair 2
nta03430 Mismatch repair 2
nta03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
osa03010 Ribosome 2
osa03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 8
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
hvu03013 Nucleocytoplasmic transport 2
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 5
sbi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106408423 106381574 106411274 103848827 103827960 834392 839575 107915024 107902774 107948913 102612014 100811305 100784700 100249350 18101579 7474162 25484460 101268030 102592527 107830066 107789099 4334430 100191329 123123219 123113692 123105423 123452726 8061166 100830238 66055090
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