ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bna-r.1	BNAC09G34100D	uncharacterized BNAC09G34100D
bna-r.1	BNAA06G17600D	uncharacterized BNAA06G17600D
bna-r.1	106347712	uncharacterized LOC106347712
bna-r.1	BNAA10G29120D	uncharacterized BNAA10G29120D
bra-r.6	103873590	uncharacterized LOC103873590
bra-r.6	103845311	uncharacterized LOC103845311
ath-u.5	AT3G47070	thylakoid soluble phosphoprotein
ghi-r.1	107888008	uncharacterized LOC107888008
ghi-r.1	107959178	uncharacterized LOC107959178
ghi-r.1	107950870	uncharacterized LOC107950870
cit-r.1	102613315	hypothetical protein
gma-u.5	100788940	uncharacterized LOC100788940
gma-u.5	100789683	uncharacterized LOC100789683
vvi-u.5	100265554	uncharacterized LOC100265554
ppo-u.5	7468576	uncharacterized LOC7468576
ppo-u.5	7478543	uncharacterized LOC7478543
mtr-u.5	25490816	uncharacterized LOC25490816
mtr-u.5	11411948	uncharacterized LOC11411948
sly-u.5	101259757	uncharacterized LOC101259757
sot-r.1	107061263	uncharacterized LOC107061263
nta-r.1	107790965	uncharacterized LOC107790965
osa-u.5	4334638	uncharacterized LOC4334638
osa-u.5	9271497	uncharacterized LOC9271497
zma-u.5	100281325	uncharacterized LOC100281325
zma-u.5	100275878	uncharacterized LOC100275878
tae-r.2	123123561	uncharacterized LOC123123561
tae-r.2	123105734	uncharacterized LOC123105734
tae-r.2	123114066	uncharacterized LOC123114066
hvu-r.1	123453123	uncharacterized LOC123453123
sbi-r.1	8079702	uncharacterized LOC8079702
sbi-r.1	8081792	uncharacterized LOC8081792
bdi-r.1	100828672	uncharacterized LOC100828672

Top 50 coexpressed genes to BNAC09G34100D (bna-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to BNAC09G34100D (bna-r.1 coexpression data)

CoexMap"106410324"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0009507 [list] [network] chloroplast

(1821 genes)

IEA

GO MF

Protein

XP_013706273.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 7, nucl 1, mito 1

(predict for XP_013706273.2)

Subcellular
localization
TargetP

chlo 6, mito 3

(predict for XP_013706273.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for BNAC09G34100D	bna-r.1 for BNAA06G17600D	bna-r.1 for 106347712	bna-r.1 for BNAA10G29120D	bra-r.6 for 103873590	bra-r.6 for 103845311	ath-u.5 for AT3G47070	ghi-r.1 for 107888008	ghi-r.1 for 107959178	ghi-r.1 for 107950870	cit-r.1 for 102613315	gma-u.5 for 100788940	gma-u.5 for 100789683	vvi-u.5 for 100265554	ppo-u.5 for 7468576	ppo-u.5 for 7478543	mtr-u.5 for 25490816	mtr-u.5 for 11411948	sly-u.5 for 101259757	sot-r.1 for 107061263	nta-r.1 for 107790965	osa-u.5 for 4334638	osa-u.5 for 9271497	zma-u.5 for 100281325	zma-u.5 for 100275878	tae-r.2 for 123123561	tae-r.2 for 123105734	tae-r.2 for 123114066	hvu-r.1 for 123453123	sbi-r.1 for 8079702	sbi-r.1 for 8081792	bdi-r.1 for 100828672

Ortholog

Ortholog ID: 5122

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized BNAC09G34100D

uncharacterized BNAA06G17600D

uncharacterized BNAC03G75130D

uncharacterized LOC103873590

uncharacterized LOC103845311

thylakoid soluble phosphoprotein

uncharacterized LOC107888008

uncharacterized LOC107950870

uncharacterized LOC107906609

hypothetical protein

uncharacterized LOC100788940

uncharacterized LOC100789683

uncharacterized LOC100265554

uncharacterized LOC7468576

uncharacterized LOC7478543

uncharacterized LOC25490816

uncharacterized LOC11411948

uncharacterized LOC101259757

uncharacterized LOC107061263

uncharacterized LOC107790965

uncharacterized LOC4334638

uncharacterized LOC9271497

uncharacterized LOC100275878

uncharacterized LOC123123561

uncharacterized LOC123105734

uncharacterized LOC123114066

uncharacterized LOC123453123

uncharacterized LOC8079702

uncharacterized LOC8081792

uncharacterized LOC100828672

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00195	Photosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00195	Photosynthesis	4
bra00710	Carbon fixation by Calvin cycle	2
bra01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00195	Photosynthesis	8
bra00710	Carbon fixation by Calvin cycle	2
bra01200	Carbon metabolism	2
bra00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00195	Photosynthesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00195	Photosynthesis	3
ghi02010	ABC transporters	2
ghi04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	4
ghi00260	Glycine, serine and threonine metabolism	4
ghi00630	Glyoxylate and dicarboxylate metabolism	4
ghi00670	One carbon pool by folate	4
ghi00785	Lipoic acid metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00260	Glycine, serine and threonine metabolism	6
ghi00630	Glyoxylate and dicarboxylate metabolism	6
ghi00670	One carbon pool by folate	6
ghi00785	Lipoic acid metabolism	6
ghi01200	Carbon metabolism	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00195	Photosynthesis	6
cit00710	Carbon fixation by Calvin cycle	3
cit01200	Carbon metabolism	3
cit00010	Glycolysis / Gluconeogenesis	2
cit01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01200	Carbon metabolism	6
gma00630	Glyoxylate and dicarboxylate metabolism	3
gma00710	Carbon fixation by Calvin cycle	3
gma00260	Glycine, serine and threonine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01200	Carbon metabolism	5
gma00630	Glyoxylate and dicarboxylate metabolism	4
gma00260	Glycine, serine and threonine metabolism	2
gma00906	Carotenoid biosynthesis	2
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00710	Carbon fixation by Calvin cycle	2
vvi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00195	Photosynthesis	13
ppo00196	Photosynthesis - antenna proteins	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00195	Photosynthesis	4
ppo00710	Carbon fixation by Calvin cycle	3
ppo01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00195	Photosynthesis	7
mtr00710	Carbon fixation by Calvin cycle	4
mtr01200	Carbon metabolism	4
mtr00196	Photosynthesis - antenna proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00195	Photosynthesis	5
sly01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00710	Carbon fixation by Calvin cycle	8
nta01200	Carbon metabolism	8
nta00010	Glycolysis / Gluconeogenesis	4
nta00030	Pentose phosphate pathway	4
nta00051	Fructose and mannose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00195	Photosynthesis	3
osa00010	Glycolysis / Gluconeogenesis	2
osa00030	Pentose phosphate pathway	2
osa00051	Fructose and mannose metabolism	2
osa00710	Carbon fixation by Calvin cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00195	Photosynthesis	5
osa00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00195	Photosynthesis	8
zma00196	Photosynthesis - antenna proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00710	Carbon fixation by Calvin cycle	11
tae01200	Carbon metabolism	11
tae00010	Glycolysis / Gluconeogenesis	5
tae00030	Pentose phosphate pathway	5
tae00051	Fructose and mannose metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00710	Carbon fixation by Calvin cycle	5
tae01200	Carbon metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00710	Carbon fixation by Calvin cycle	10
tae01200	Carbon metabolism	10
tae00195	Photosynthesis	2
tae00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01200	Carbon metabolism	7
hvu00710	Carbon fixation by Calvin cycle	5
hvu00630	Glyoxylate and dicarboxylate metabolism	3
hvu00010	Glycolysis / Gluconeogenesis	3
hvu00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00710	Carbon fixation by Calvin cycle	4
sbi01200	Carbon metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00195	Photosynthesis	9
sbi00710	Carbon fixation by Calvin cycle	3
sbi01200	Carbon metabolism	3
sbi00196	Photosynthesis - antenna proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00195	Photosynthesis	3

Expression

Expression pattern

Entrez Gene ID^*

106410324

106371351

106411350

103873590

103845311

823860

107888008

107950870

107906609

102613315

100788940

100789683

100265554

7468576

7478543

25490816

11411948

101259757

107061263

107790965

4334638

9271497

100275878

123123561

123105734

123114066

123453123

8079702

8081792

100828672

The preparation time of this page was 0.2 [sec].


Species	bna	bra	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	1	3	1	2	1	2	2	1	1	1	2	2	3	1	2	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to BNAC09G34100D (bna-r.1 coexpression data)

Top 50 enrichment test to BNAC09G34100D (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**