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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106411412   ATP-dependent Clp protease adapter protein CLPS1, chloroplastic 
 bna-r.1   106393287   ATP-dependent Clp protease adapter protein CLPS1, chloroplastic 
 bna-r.1   106353842   ATP-dependent Clp protease adapter protein CLPS1, chloroplastic 
 bra-r.6   103852515   ATP-dependent Clp protease adapter protein CLPS1, chloroplastic 
 bra-r.6   103830957   ATP-dependent Clp protease adapter protein CLPS1, chloroplastic 
 ath-u.5   AT1G68660   Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein 
 ghi-r.1   107918437   ATP-dependent Clp protease adapter protein CLPS1, chloroplastic 
 ghi-r.1   107932406   ATP-dependent Clp protease adapter protein CLPS1, chloroplastic 
 ghi-r.1   107932379   ATP-dependent Clp protease adapter protein CLPS1, chloroplastic 
 cit-r.1   102625837   ATP-dependent Clp protease adapter protein CLPS1, chloroplastic 
 gma-u.5   100785379   ATP-dependent Clp protease adapter protein CLPS1, chloroplastic 
 gma-u.5   100527361   uncharacterized LOC100527361 
 gma-u.5   100500511   uncharacterized LOC100500511 
 vvi-u.5   100247572   ATP-dependent Clp protease adapter protein CLPS1, chloroplastic 
 vvi-u.5   100242343   ATP-dependent Clp protease adapter protein ClpS-like 
 ppo-u.5   7489365   ATP-dependent Clp protease adapter protein CLPS1, chloroplastic 
 ppo-u.5   7488342   ATP-dependent Clp protease adapter protein CLPS1, chloroplastic 
 mtr-u.5   11435900   ATP-dependent Clp protease adapter protein CLPS1, chloroplastic 
 mtr-u.5   25496881   ATP-dependent Clp protease adapter protein CLPS1, chloroplastic 
 sly-u.5   101260326   ATP-dependent Clp protease adapter protein CLPS1, chloroplastic 
 sot-r.1   102601216   ATP-dependent Clp protease adapter protein CLPS1, chloroplastic 
 nta-r.1   107786689   ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like 
 nta-r.1   107829685   ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like 
 osa-u.5   4345646   ATP-dependent Clp protease adapter protein CLPS1, chloroplastic 
 zma-u.5   100284003   ATP-dependent Clp protease adaptor protein ClpS containing protein 
 zma-u.5   100281931   ATP-dependent Clp protease adaptor protein ClpS containing protein 
 tae-r.2   123043145   ATP-dependent Clp protease adapter protein CLPS1, chloroplastic 
 tae-r.2   123051042   ATP-dependent Clp protease adapter protein CLPS1, chloroplastic 
 tae-r.2   123186979   ATP-dependent Clp protease adapter protein CLPS1, chloroplastic 
 hvu-r.1   123419822   ATP-dependent Clp protease adapter protein CLPS1, chloroplastic 
 sbi-r.1   8075662   ATP-dependent Clp protease adapter protein CLPS1, chloroplastic 
 bdi-r.1   100827598   ATP-dependent Clp protease adapter protein CLPS1, chloroplastic 
 cre-r.1   CHLRE_17g696400v5   uncharacterized protein 

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Top 50 coexpressed genes to 106411412 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106411412 (bna-r.1 coexpression data)

CoexMap"106411412"


bnaLOC106411412 | Entrez gene ID : 106411412    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 2 1 3 1 3 2 2 2 1 1 2 1 2 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0030163 [list] [network] protein catabolic process  (1285 genes)  IEA  
GO:0006508 [list] [network] proteolysis  (2595 genes)  IEA  
GO CC
GO MF
Protein XP_013707624.2 [sequence] [blastp]
XP_013707625.2 [sequence] [blastp]
XP_022560854.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1,  cyto 1,  cyto_nucl 1,  E.R._vacu 1  (predict for XP_013707624.2)
chlo 6,  cyto 3  (predict for XP_013707625.2)
cyto 6,  nucl 1,  mito 1,  plas 1,  cysk 1,  cysk_plas 1,  mito_plas 1  (predict for XP_022560854.2)
Subcellular
localization
TargetP
chlo 4,  other 4  (predict for XP_013707624.2)
other 4  (predict for XP_013707625.2)
other 8  (predict for XP_022560854.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106411412
bna-r.1
for
106393287
bna-r.1
for
106353842
bra-r.6
for
103852515
bra-r.6
for
103830957
ath-u.5
for
AT1G68660
ghi-r.1
for
107918437
ghi-r.1
for
107932406
ghi-r.1
for
107932379
cit-r.1
for
102625837
gma-u.5
for
100785379
gma-u.5
for
100527361
gma-u.5
for
100500511
vvi-u.5
for
100247572
vvi-u.5
for
100242343
ppo-u.5
for
7489365
ppo-u.5
for
7488342
mtr-u.5
for
11435900
mtr-u.5
for
25496881
sly-u.5
for
101260326
sot-r.1
for
102601216
nta-r.1
for
107786689
nta-r.1
for
107829685
osa-u.5
for
4345646
zma-u.5
for
100284003
zma-u.5
for
100281931
tae-r.2
for
123043145
tae-r.2
for
123051042
tae-r.2
for
123186979
hvu-r.1
for
123419822
sbi-r.1
for
8075662
bdi-r.1
for
100827598
cre-r.1
for
CHLRE_17g696400v5


Ortholog ID: 6160
Species bna bna bna bra bra ath ghi ghi ghi cit gma gma gma vvi vvi ppo ppo mtr mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC106411412 LOC106393287 LOC106353842 LOC103852515 LOC103830957 AT1G68660 LOC107918437 LOC107932379 LOC107920405 LOC102625837 LOC100527361 LOC100500511 LOC100306117 LOC100247572 LOC100242343 LOC7489365 LOC7488342 LOC11435900 LOC25496881 LOC101260326 LOC102601216 LOC107786689 LOC107829685 LOC4345646 LOC100284003 LOC100281931 LOC123043145 LOC123051042 LOC123186979 LOC123419822 LOC8075662 LOC100827598 CHLRE_17g696400v5
Function* ATP-dependent Clp protease adapter protein CLPS1, chloroplastic ATP-dependent Clp protease adapter protein CLPS1, chloroplastic ATP-dependent Clp protease adapter protein CLPS1, chloroplastic ATP-dependent Clp protease adapter protein CLPS1, chloroplastic ATP-dependent Clp protease adapter protein CLPS1, chloroplastic Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein ATP-dependent Clp protease adapter protein CLPS1, chloroplastic ATP-dependent Clp protease adapter protein CLPS1, chloroplastic ATP-dependent Clp protease adapter protein CLPS1, chloroplastic ATP-dependent Clp protease adapter protein CLPS1, chloroplastic uncharacterized LOC100527361 uncharacterized LOC100500511 putative ATP-dependent Clp protease adapter protein CLPS1, chloroplastic ATP-dependent Clp protease adapter protein CLPS1, chloroplastic ATP-dependent Clp protease adapter protein ClpS-like ATP-dependent Clp protease adapter protein CLPS1, chloroplastic ATP-dependent Clp protease adapter protein CLPS1, chloroplastic ATP-dependent Clp protease adapter protein CLPS1, chloroplastic ATP-dependent Clp protease adapter protein CLPS1, chloroplastic ATP-dependent Clp protease adapter protein CLPS1, chloroplastic ATP-dependent Clp protease adapter protein CLPS1, chloroplastic ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like ATP-dependent Clp protease adapter protein CLPS1, chloroplastic ATP-dependent Clp protease adaptor protein ClpS containing protein ATP-dependent Clp protease adaptor protein ClpS containing protein ATP-dependent Clp protease adapter protein CLPS1, chloroplastic ATP-dependent Clp protease adapter protein CLPS1, chloroplastic ATP-dependent Clp protease adapter protein CLPS1, chloroplastic ATP-dependent Clp protease adapter protein CLPS1, chloroplastic ATP-dependent Clp protease adapter protein CLPS1, chloroplastic ATP-dependent Clp protease adapter protein CLPS1, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00750 Vitamin B6 metabolism 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 5
ghi03010 Ribosome 5
ghi04146 Peroxisome 2
ghi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 2
ghi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 2
ghi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 4
gma00220 Arginine biosynthesis 2
gma00250 Alanine, aspartate and glutamate metabolism 2
gma00260 Glycine, serine and threonine metabolism 2
gma00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 5
tae01200 Carbon metabolism 5
tae00710 Carbon fixation by Calvin cycle 4
tae00020 Citrate cycle (TCA cycle) 3
tae00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00020 Citrate cycle (TCA cycle) 3
tae00270 Cysteine and methionine metabolism 3
tae00566 Sulfoquinovose metabolism 3
tae00620 Pyruvate metabolism 3
tae00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00260 Glycine, serine and threonine metabolism 2
tae00630 Glyoxylate and dicarboxylate metabolism 2
tae01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 3
bdi00630 Glyoxylate and dicarboxylate metabolism 2
bdi00900 Terpenoid backbone biosynthesis 2
bdi00460 Cyanoamino acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106411412 106393287 106353842 103852515 103830957 843196 107918437 107932379 107920405 102625837 100527361 100500511 100306117 100247572 100242343 7489365 7488342 11435900 25496881 101260326 102601216 107786689 107829685 4345646 100284003 100281931 123043145 123051042 123186979 123419822 8075662 100827598 5717389
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