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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106411727   copper chaperone for superoxide dismutase, chloroplastic/cytosolic 
 ath-u.5   CCS   copper chaperone for SOD1 
 gma-u.5   CCS   Cu/Zn-superoxide dismutase copper chaperone 
 vvi-u.5   100263358   copper chaperone for superoxide dismutase, chloroplastic/cytosolic 
 ppo-u.5   18094427   copper chaperone for superoxide dismutase, chloroplastic/cytosolic 
 ppo-u.5   7465821   copper chaperone for superoxide dismutase, chloroplastic/cytosolic 
 mtr-u.5   11407925   copper chaperone for superoxide dismutase, chloroplastic/cytosolic 
 sly-u.5   CCS   copper chaperone for superoxide dismutase 
 osa-u.5   4336726   copper chaperone for superoxide dismutase, chloroplastic-like 
 zma-u.5   103641949   copper chaperone for superoxide dismutase, chloroplastic 
 zma-u.5   100283786   uncharacterized LOC100283786 

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Top 50 coexpressed genes to 106411727 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106411727 (bna-r.1 coexpression data)

CoexMap"106411727"


bnaLOC106411727 | Entrez gene ID : 106411727    
Species bna ath gma vvi ppo mtr sly osa zma hvu cit bra ghi sbi bdi nta tae cre sot
Paralog 1 1 1 1 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0019430 [list] [network] removal of superoxide radicals  (29 genes)  IEA  
GO CC
GO MF
GO:0004784 [list] [network] superoxide dismutase activity  (29 genes)  IEA  
GO:0005507 [list] [network] copper ion binding  (203 genes)  IEA  
Protein XP_013707992.1 [sequence] [blastp]
XP_022564638.1 [sequence] [blastp]
XP_048621292.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_013707992.1)
chlo 10  (predict for XP_022564638.1)
chlo 10  (predict for XP_048621292.1)
Subcellular
localization
TargetP
chlo 6  (predict for XP_013707992.1)
chlo 6  (predict for XP_022564638.1)
chlo 6  (predict for XP_048621292.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106411727
ath-u.5
for
CCS
gma-u.5
for
CCS
vvi-u.5
for
100263358
ppo-u.5
for
18094427
ppo-u.5
for
7465821
mtr-u.5
for
11407925
sly-u.5
for
CCS
osa-u.5
for
4336726
zma-u.5
for
103641949
zma-u.5
for
100283786


Ortholog ID: 8691
Species bna bna bra bra ath ghi ghi cit gma vvi ppo ppo mtr sly sot nta nta osa zma zma tae tae hvu sbi bdi
Symbol LOC106382386 LOC106435985 LOC103843124 LOC103836158 CCS LOC107930044 LOC107926973 LOC102620720 CCS LOC100263358 LOC18094427 LOC7465821 LOC11407925 CCS LOC102598129 LOC107828097 LOC107800528 LOC4336726 LOC103641949 LOC100283786 LOC123190020 LOC123054125 LOC123427455 LOC110436325 LOC100833344
Function* copper chaperone for superoxide dismutase, chloroplastic/cytosolic-like copper chaperone for superoxide dismutase, chloroplastic/cytosolic copper chaperone for superoxide dismutase, chloroplastic/cytosolic copper chaperone for superoxide dismutase, chloroplastic/cytosolic copper chaperone for SOD1 copper chaperone for superoxide dismutase, chloroplastic/cytosolic copper chaperone for superoxide dismutase, chloroplastic/cytosolic copper chaperone for superoxide dismutase, chloroplastic/cytosolic Cu/Zn-superoxide dismutase copper chaperone copper chaperone for superoxide dismutase, chloroplastic/cytosolic copper chaperone for superoxide dismutase, chloroplastic/cytosolic copper chaperone for superoxide dismutase, chloroplastic/cytosolic copper chaperone for superoxide dismutase, chloroplastic/cytosolic copper chaperone for superoxide dismutase copper chaperone for superoxide dismutase, chloroplastic/cytosolic copper chaperone for superoxide dismutase, chloroplastic/cytosolic copper chaperone for superoxide dismutase, chloroplastic/cytosolic-like copper chaperone for superoxide dismutase, chloroplastic-like copper chaperone for superoxide dismutase, chloroplastic uncharacterized LOC100283786 copper chaperone for superoxide dismutase, chloroplastic copper chaperone for superoxide dismutase, chloroplastic copper chaperone for superoxide dismutase, chloroplastic copper chaperone for superoxide dismutase, chloroplastic copper chaperone for superoxide dismutase, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 4
ghi00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 4
ghi00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 5
gma00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04146 Peroxisome 3
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04146 Peroxisome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04146 Peroxisome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 7
mtr01200 Carbon metabolism 3
mtr03010 Ribosome 2
mtr00020 Citrate cycle (TCA cycle) 2
mtr00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 3
sly00010 Glycolysis / Gluconeogenesis 2
sly00710 Carbon fixation by Calvin cycle 2
sly01200 Carbon metabolism 2
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04146 Peroxisome 4
osa01230 Biosynthesis of amino acids 2
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 6
zma04146 Peroxisome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106382386 106435985 103843124 103836158 837808 107930044 107926973 102620720 547617 100263358 18094427 7465821 11407925 544169 102598129 107828097 107800528 4336726 103641949 100283786 123190020 123054125 123427455 110436325 100833344
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