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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106412953   E3 ubiquitin-protein ligase RSL1 
 bna-r.1   106349730   E3 ubiquitin-protein ligase RSL1-like 
 bna-r.1   106413201   E3 ubiquitin-protein ligase RSL1 
 bra-r.6   103836882   uncharacterized LOC103836882 
 bra-r.6   103836958   E3 ubiquitin-protein ligase dbl4 
 bra-r.6   103841360   ATP-dependent RNA helicase DEAH12, chloroplastic 

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Top 50 coexpressed genes to 106412953 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106412953 (bna-r.1 coexpression data)

CoexMap"106412953"


bnaLOC106412953 | Entrez gene ID : 106412953    
Species bna bra vvi bdi ppo sbi gma ghi cit hvu sot sly nta osa tae zma cre mtr ath
Paralog 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0032436 [list] [network] positive regulation of proteasomal ubiquitin-dependent protein catabolic process  (127 genes)  IEA  
GO:0000209 [list] [network] protein polyubiquitination  (267 genes)  IEA  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (910 genes)  IEA  
GO CC
GO:0000151 [list] [network] ubiquitin ligase complex  (468 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (16489 genes)  IEA  
GO MF
GO:0031624 [list] [network] ubiquitin conjugating enzyme binding  (113 genes)  IEA  
GO:0061630 [list] [network] ubiquitin protein ligase activity  (605 genes)  IEA  
GO:0004523 [list] [network] RNA-DNA hybrid ribonuclease activity  (863 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (3493 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (12766 genes)  IEA  
Protein XP_013709273.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 1,  cyto 1  (predict for XP_013709273.1)
Subcellular
localization
TargetP
other 8  (predict for XP_013709273.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106412953
bna-r.1
for
106349730
bna-r.1
for
106413201
bra-r.6
for
103836882
bra-r.6
for
103836958
bra-r.6
for
103841360


Ortholog ID: 15810
Species bna bna bna bra bra bra
Symbol LOC106412953 LOC106349730 LOC106413201 LOC103836882 LOC103836958 LOC103841360
Function* E3 ubiquitin-protein ligase RSL1 E3 ubiquitin-protein ligase RSL1-like E3 ubiquitin-protein ligase RSL1 uncharacterized LOC103836882 E3 ubiquitin-protein ligase dbl4 ATP-dependent RNA helicase DEAH12, chloroplastic
Coexmap

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Coexpression

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KEGG Info
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106412953 106349730 106413201 103836882 103836958 103841360
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