ATTED-II : GeneCoexpression result

Species	Gene	Description
bna-r.1	106413805	probable U3 small nucleolar RNA-associated protein 11
bna-r.1	106449098	probable U3 small nucleolar RNA-associated protein 11
bna-r.1	106413772	probable U3 small nucleolar RNA-associated protein 11
bna-r.1	111215147	probable U3 small nucleolar RNA-associated protein 11
bra-r.6	103862887	probable U3 small nucleolar RNA-associated protein 11
bra-r.6	103841888	probable U3 small nucleolar RNA-associated protein 11
ath-u.5	EDA14	embryo sac development arrest 14
ghi-r.1	107898946	probable U3 small nucleolar RNA-associated protein 11
ghi-r.1	107937673	probable U3 small nucleolar RNA-associated protein 11
ghi-r.1	121211439	probable U3 small nucleolar RNA-associated protein 11
cit-r.1	102612867	probable U3 small nucleolar RNA-associated protein 11
cit-r.1	102608730	probable U3 small nucleolar RNA-associated protein 11
gma-u.5	100817888	probable U3 small nucleolar RNA-associated protein 11
gma-u.5	100794686	probable U3 small nucleolar RNA-associated protein 11
vvi-u.5	100255309	probable U3 small nucleolar RNA-associated protein 11
ppo-u.5	7453744	probable U3 small nucleolar RNA-associated protein 11
mtr-u.5	25493324	probable U3 small nucleolar RNA-associated protein 11
sly-u.5	101246578	probable U3 small nucleolar RNA-associated protein 11
sot-r.1	102596114	probable U3 small nucleolar RNA-associated protein 11
nta-r.1	107832006	putative U3 small nucleolar RNA-associated protein 11
nta-r.1	107815481	putative U3 small nucleolar RNA-associated protein 11
nta-r.1	107788842	putative U3 small nucleolar RNA-associated protein 11
osa-u.5	4327566	probable U3 small nucleolar RNA-associated protein 11
zma-u.5	100283970	U3 small nucleolar RNA-associated protein 11
tae-r.2	123079496	probable U3 small nucleolar RNA-associated protein 11
hvu-r.1	123444655	probable U3 small nucleolar RNA-associated protein 11
sbi-r.1	8055271	probable U3 small nucleolar RNA-associated protein 11
bdi-r.1	100822418	probable U3 small nucleolar RNA-associated protein 11
cre-r.1	CHLRE_13g573050v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO:0006364 [list] [network] rRNA processing

(647 genes)

IEA

GO CC

GO:0032040 [list] [network] small-subunit processome	(155 genes)	IEA
GO:0005730 [list] [network] nucleolus	(615 genes)	IEA

GO MF

Protein

XP_013710002.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, chlo 4, mito 2, cyto_nucl 2, cysk_nucl 2, nucl_plas 2

(predict for XP_013710002.1)

Subcellular
localization
TargetP

mito 5, other 4

(predict for XP_013710002.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106413805	bna-r.1 for 106449098	bna-r.1 for 106413772	bna-r.1 for 111215147	bra-r.6 for 103862887	bra-r.6 for 103841888	ath-u.5 for EDA14	ghi-r.1 for 107898946	ghi-r.1 for 107937673	ghi-r.1 for 121211439	cit-r.1 for 102612867	cit-r.1 for 102608730	gma-u.5 for 100817888	gma-u.5 for 100794686	vvi-u.5 for 100255309	ppo-u.5 for 7453744	mtr-u.5 for 25493324	sly-u.5 for 101246578	sot-r.1 for 102596114	nta-r.1 for 107832006	nta-r.1 for 107815481	nta-r.1 for 107788842	osa-u.5 for 4327566	zma-u.5 for 100283970	tae-r.2 for 123079496	hvu-r.1 for 123444655	sbi-r.1 for 8055271	bdi-r.1 for 100822418	cre-r.1 for CHLRE_13g573050v5

Ortholog

Ortholog ID: 6292

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

EDA14

Function^*

probable U3 small nucleolar RNA-associated protein 11

embryo sac development arrest 14

probable U3 small nucleolar RNA-associated protein 11

putative U3 small nucleolar RNA-associated protein 11

probable U3 small nucleolar RNA-associated protein 11

U3 small nucleolar RNA-associated protein 11

probable U3 small nucleolar RNA-associated protein 11

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03020	RNA polymerase	2
bna03013	Nucleocytoplasmic transport	2
bna03015	mRNA surveillance pathway	2
bna03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	4
bna03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	3
bna03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	3
bra03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03018	RNA degradation	3
ath03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03013	Nucleocytoplasmic transport	3
cit03015	mRNA surveillance pathway	3
cit03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	3
vvi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03020	RNA polymerase	3
ppo03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03050	Proteasome	6
mtr03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03008	Ribosome biogenesis in eukaryotes	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	2
nta00380	Tryptophan metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00970	Aminoacyl-tRNA biosynthesis	4
osa03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03008	Ribosome biogenesis in eukaryotes	3
hvu03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03008	Ribosome biogenesis in eukaryotes	6
bdi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03008	Ribosome biogenesis in eukaryotes	4

Expression

Expression pattern

Entrez Gene ID^*

106449098

106413772

111215147

103862887

103841888

825207

107898946

107937673

121211439

102612867

102608730

100817888

100794686

100255309

7453744

25493324

101246578

102596114

107832006

107815481

107788842

4327566

100283970

123079496

123444655

8055271

100822418

5719177

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 106413805 (bna-r.1 coexpression data)

Top 50 enrichment test to 106413805 (bna-r.1 coexpression data)


Species	bna	bra	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	1	3	2	2	1	1	1	1	1	3	1	1	1	1	1	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 106413805 (bna-r.1 coexpression data)

Top 50 enrichment test to 106413805 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**