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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106413872   putative DNA glycosylase At3g47830 
 bna-r.1   111215525   putative DNA glycosylase At3g47830 
 ghi-r.1   121224464   putative DNA glycosylase At3g47830 
 ghi-r.1   107941538   putative DNA glycosylase At3g47830 
 cit-r.1   102627550   putative DNA glycosylase At3g47830 
 gma-u.5   100802952   putative DNA glycosylase At3g47830 
 vvi-u.5   100257083   putative DNA glycosylase At3g47830 
 ppo-u.5   7474873   putative DNA glycosylase At3g47830 
 mtr-u.5   11405585   putative DNA glycosylase At3g47830 
 sly-u.5   101257755   putative DNA glycosylase At3g47830 
 sot-r.1   102582844   putative DNA glycosylase At3g47830 
 nta-r.1   107783606   putative DNA glycosylase At3g47830 
 nta-r.1   107760355   putative DNA glycosylase At3g47830 
 osa-u.5   4340610   putative DNA glycosylase At3g47830 
 zma-u.5   107275233   uncharacterized LOC107275233 
 tae-r.2   123152417   putative DNA glycosylase At3g47830 
 tae-r.2   123161985   putative DNA glycosylase At3g47830 
 hvu-r.1   123411211   putative DNA glycosylase At3g47830 
 bdi-r.1   100825895   putative DNA glycosylase At3g47830 

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Top 50 coexpressed genes to 106413872 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106413872 (bna-r.1 coexpression data)

CoexMap"106413872"


bnaLOC106413872 | Entrez gene ID : 106413872    
Species bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu bdi bra cre sbi ath
Paralog 2 2 1 1 1 1 1 1 1 2 1 1 2 1 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03410 [list] [network] Base excision repair (126 genes)
GO BP
GO:0006284 [list] [network] base-excision repair  (68 genes)  IEA  
GO CC
GO MF
GO:0003824 [list] [network] catalytic activity  (26025 genes)  IEA  
Protein XP_013710063.2 [sequence] [blastp]
XP_022550734.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  mito 1,  plas 1,  cysk 1,  chlo_mito 1,  cyto_mito 1,  cysk_plas 1  (predict for XP_013710063.2)
nucl 6,  mito 2,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_022550734.1)
Subcellular
localization
TargetP
other 6  (predict for XP_013710063.2)
other 6  (predict for XP_022550734.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106413872
bna-r.1
for
111215525
ghi-r.1
for
121224464
ghi-r.1
for
107941538
cit-r.1
for
102627550
gma-u.5
for
100802952
vvi-u.5
for
100257083
ppo-u.5
for
7474873
mtr-u.5
for
11405585
sly-u.5
for
101257755
sot-r.1
for
102582844
nta-r.1
for
107783606
nta-r.1
for
107760355
osa-u.5
for
4340610
zma-u.5
for
107275233
tae-r.2
for
123152417
tae-r.2
for
123161985
hvu-r.1
for
123411211
bdi-r.1
for
100825895


Ortholog ID: 10812
Species bna bna ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu bdi
Symbol LOC106413872 LOC111215525 LOC121224464 LOC107941538 LOC102627550 LOC100802952 LOC100257083 LOC7474873 LOC11405585 LOC101257755 LOC102582844 LOC107783606 LOC107760355 LOC4340610 LOC107275233 LOC123152417 LOC123161985 LOC123411211 LOC100825895
Function* putative DNA glycosylase At3g47830 putative DNA glycosylase At3g47830 putative DNA glycosylase At3g47830 putative DNA glycosylase At3g47830 putative DNA glycosylase At3g47830 putative DNA glycosylase At3g47830 putative DNA glycosylase At3g47830 putative DNA glycosylase At3g47830 putative DNA glycosylase At3g47830 putative DNA glycosylase At3g47830 putative DNA glycosylase At3g47830 putative DNA glycosylase At3g47830 putative DNA glycosylase At3g47830 putative DNA glycosylase At3g47830 uncharacterized LOC107275233 putative DNA glycosylase At3g47830 putative DNA glycosylase At3g47830 putative DNA glycosylase At3g47830 putative DNA glycosylase At3g47830
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 3
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 3
sly04016 MAPK signaling pathway - plant 2
sly00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta04141 Protein processing in endoplasmic reticulum 2
nta03410 Base excision repair 2
nta00240 Pyrimidine metabolism 2
nta00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04145 Phagosome 6
tae04517 IgSF CAM signaling 6
tae04814 Motor proteins 6
tae03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04145 Phagosome 3
tae04517 IgSF CAM signaling 3
tae04814 Motor proteins 3
tae03410 Base excision repair 2
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03410 Base excision repair 2
hvu00941 Flavonoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106413872 111215525 121224464 107941538 102627550 100802952 100257083 7474873 11405585 101257755 102582844 107783606 107760355 4340610 107275233 123152417 123161985 123411211 100825895
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