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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106417438   phytochrome-associated serine/threonine-protein phosphatase 3 
 bna-r.1   125608849   phytochrome-associated serine/threonine-protein phosphatase 3 
 bna-r.1   106439037   phytochrome-associated serine/threonine-protein phosphatase 3 
 bna-r.1   111204553   phytochrome-associated serine/threonine-protein phosphatase 3-like 
 bra-r.6   103859834   phytochrome-associated serine/threonine-protein phosphatase 3 
 bra-r.6   103836788   phytochrome-associated serine/threonine-protein phosphatase 3 
 ath-u.5   FYPP3   flower-specific, phytochrome-associated protein phosphatase 3 
 ath-u.5   FYPP1   Calcineurin-like metallo-phosphoesterase superfamily protein 
 ghi-r.1   107900971   phytochrome-associated serine/threonine-protein phosphatase 
 ghi-r.1   107928977   phytochrome-associated serine/threonine-protein phosphatase 
 ghi-r.1   107948107   phytochrome-associated serine/threonine-protein phosphatase 1 
 cit-r.1   102615860   phytochrome-associated serine/threonine-protein phosphatase 
 gma-u.5   100820006   phytochrome-associated serine/threonine protein phosphatase-like 
 gma-u.5   100805081   phytochrome-associated serine/threonine protein phosphatase-like 
 vvi-u.5   100852922   phytochrome-associated serine/threonine-protein phosphatase 
 ppo-u.5   7490606   phytochrome-associated serine/threonine-protein phosphatase 
 ppo-u.5   7455513   phytochrome-associated serine/threonine-protein phosphatase 
 mtr-u.5   11424262   phytochrome-associated serine/threonine-protein phosphatase 
 sly-u.5   101249929   phytochrome-associated serine/threonine-protein phosphatase 3-like 
 sly-u.5   101253161   phytochrome-associated serine/threonine-protein phosphatase 3 
 sot-r.1   102605875   phytochrome-associated serine/threonine-protein phosphatase 3-like 
 sot-r.1   102600476   phytochrome-associated serine/threonine-protein phosphatase 3 
 nta-r.1   107776007   phytochrome-associated serine/threonine-protein phosphatase 3 
 nta-r.1   107778280   phytochrome-associated serine/threonine-protein phosphatase 
 nta-r.1   107809565   phytochrome-associated serine/threonine-protein phosphatase 3 
 osa-u.5   4325641   phytochrome-associated serine/threonine-protein phosphatase 
 zma-u.5   100382798   Serine/threonine-protein phosphatase 
 zma-u.5   100274310   uncharacterized LOC100274310 
 tae-r.2   123066352   phytochrome-associated serine/threonine-protein phosphatase 
 tae-r.2   123061823   phytochrome-associated serine/threonine-protein phosphatase 
 tae-r.2   123070513   phytochrome-associated serine/threonine-protein phosphatase 
 hvu-r.1   123444161   phytochrome-associated serine/threonine-protein phosphatase 
 hvu-r.1   123449184   phytochrome-associated serine/threonine-protein phosphatase 3-like 
 sbi-r.1   8063094   phytochrome-associated serine/threonine-protein phosphatase 
 bdi-r.1   100838896   phytochrome-associated serine/threonine-protein phosphatase 
 bdi-r.1   100823467   phytochrome-associated serine/threonine-protein phosphatase 1 
 cre-r.1   CHLRE_06g308350v5   uncharacterized protein 

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Top 50 coexpressed genes to 106417438 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106417438 (bna-r.1 coexpression data)

CoexMap"106417438"


bnaLOC106417438 | Entrez gene ID : 106417438    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 2 3 1 2 1 2 1 2 2 3 1 2 3 2 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0070262 [list] [network] peptidyl-serine dephosphorylation  (48 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (16489 genes)  IEA  
GO MF
GO:0004722 [list] [network] protein serine/threonine phosphatase activity  (368 genes)  IEA  
Protein XP_048606477.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 2,  chlo 1,  extr 1  (predict for XP_048606477.1)
Subcellular
localization
TargetP
other 9,  scret 3  (predict for XP_048606477.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106417438
bna-r.1
for
125608849
bna-r.1
for
106439037
bna-r.1
for
111204553
bra-r.6
for
103859834
bra-r.6
for
103836788
ath-u.5
for
FYPP3
ath-u.5
for
FYPP1
ghi-r.1
for
107900971
ghi-r.1
for
107928977
ghi-r.1
for
107948107
cit-r.1
for
102615860
gma-u.5
for
100820006
gma-u.5
for
100805081
vvi-u.5
for
100852922
ppo-u.5
for
7490606
ppo-u.5
for
7455513
mtr-u.5
for
11424262
sly-u.5
for
101249929
sly-u.5
for
101253161
sot-r.1
for
102605875
sot-r.1
for
102600476
nta-r.1
for
107776007
nta-r.1
for
107778280
nta-r.1
for
107809565
osa-u.5
for
4325641
zma-u.5
for
100382798
zma-u.5
for
100274310
tae-r.2
for
123066352
tae-r.2
for
123061823
tae-r.2
for
123070513
hvu-r.1
for
123444161
hvu-r.1
for
123449184
sbi-r.1
for
8063094
bdi-r.1
for
100838896
bdi-r.1
for
100823467
cre-r.1
for
CHLRE_06g308350v5


Ortholog ID: 3227
Species bna bna bna bra bra bra ath ath ghi ghi ghi cit gma gma vvi ppo ppo mtr sly sly sot sot nta nta nta osa zma zma tae tae tae hvu hvu sbi bdi bdi cre
Symbol LOC106417438 LOC106389300 LOC106402313 LOC103859834 LOC103836788 LOC103832883 FYPP3 FYPP1 LOC107900971 LOC107948107 LOC107898883 LOC102615860 LOC100820006 LOC100811943 LOC100852922 LOC7490606 LOC7455513 LOC11424262 LOC101249929 LOC101253161 LOC102605875 LOC102600476 LOC107776007 LOC107809565 LOC107772361 LOC4325641 LOC100382798 LOC100274310 LOC123061823 LOC123070513 LOC123078926 LOC123444161 LOC123449184 LOC8063094 LOC100838896 LOC100823467 CHLRE_06g308350v5
Function* phytochrome-associated serine/threonine-protein phosphatase 3 phytochrome-associated serine/threonine-protein phosphatase 3 phytochrome-associated serine/threonine-protein phosphatase 3 phytochrome-associated serine/threonine-protein phosphatase 3 phytochrome-associated serine/threonine-protein phosphatase 3 phytochrome-associated serine/threonine-protein phosphatase 1 flower-specific, phytochrome-associated protein phosphatase 3 Calcineurin-like metallo-phosphoesterase superfamily protein phytochrome-associated serine/threonine-protein phosphatase phytochrome-associated serine/threonine-protein phosphatase 1 phytochrome-associated serine/threonine-protein phosphatase 1 phytochrome-associated serine/threonine-protein phosphatase phytochrome-associated serine/threonine protein phosphatase-like phytochrome-associated serine/threonine-protein phosphatase phytochrome-associated serine/threonine-protein phosphatase phytochrome-associated serine/threonine-protein phosphatase phytochrome-associated serine/threonine-protein phosphatase phytochrome-associated serine/threonine-protein phosphatase phytochrome-associated serine/threonine-protein phosphatase 3-like phytochrome-associated serine/threonine-protein phosphatase 3 phytochrome-associated serine/threonine-protein phosphatase 3-like phytochrome-associated serine/threonine-protein phosphatase 3 phytochrome-associated serine/threonine-protein phosphatase 3 phytochrome-associated serine/threonine-protein phosphatase 3 phytochrome-associated serine/threonine-protein phosphatase 3 phytochrome-associated serine/threonine-protein phosphatase Serine/threonine-protein phosphatase uncharacterized LOC100274310 phytochrome-associated serine/threonine-protein phosphatase phytochrome-associated serine/threonine-protein phosphatase phytochrome-associated serine/threonine-protein phosphatase phytochrome-associated serine/threonine-protein phosphatase phytochrome-associated serine/threonine-protein phosphatase 3-like phytochrome-associated serine/threonine-protein phosphatase phytochrome-associated serine/threonine-protein phosphatase phytochrome-associated serine/threonine-protein phosphatase 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 6
bna03010 Ribosome 3
bna00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
bna00100 Steroid biosynthesis 2
bna00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00100 Steroid biosynthesis 2
bna03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 9
cit00510 N-Glycan biosynthesis 2
cit00513 Various types of N-glycan biosynthesis 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 5
gma04141 Protein processing in endoplasmic reticulum 3
gma00510 N-Glycan biosynthesis 2
gma00513 Various types of N-glycan biosynthesis 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00510 N-Glycan biosynthesis 4
gma00513 Various types of N-glycan biosynthesis 4
gma03008 Ribosome biogenesis in eukaryotes 3
gma04712 Circadian rhythm - plant 3
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 5
vvi03050 Proteasome 4
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 3
ppo04145 Phagosome 3
ppo04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04145 Phagosome 6
ppo04144 Endocytosis 3
ppo04148 Efferocytosis 3
ppo04517 IgSF CAM signaling 2
ppo04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 5
mtr03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 4
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 4
nta04141 Protein processing in endoplasmic reticulum 3
nta03013 Nucleocytoplasmic transport 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 5
nta03040 Spliceosome 4
nta03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 4
osa03015 mRNA surveillance pathway 3
osa04382 Cornified envelope formation 3
osa04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 2
zma04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 4
zma04382 Cornified envelope formation 4
zma04136 Autophagy - other 3
zma00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 5
sbi04120 Ubiquitin mediated proteolysis 3
sbi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
bdi03015 mRNA surveillance pathway 2
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 8
bdi04141 Protein processing in endoplasmic reticulum 4
bdi03083 Polycomb repressive complex 2
bdi04120 Ubiquitin mediated proteolysis 2
bdi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 5
cre03015 mRNA surveillance pathway 5
cre04382 Cornified envelope formation 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106417438 106389300 106402313 103859834 103836788 103832883 821536 841459 107900971 107948107 107898883 102615860 100820006 100811943 100852922 7490606 7455513 11424262 101249929 101253161 102605875 102600476 107776007 107809565 107772361 4325641 100382798 100274310 123061823 123070513 123078926 123444161 123449184 8063094 100838896 100823467 5716842
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