ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bna-r.1	106418747	transmembrane protein 18
bna-r.1	106411928	transmembrane protein 18
bna-r.1	106379342	transmembrane protein 18-like
bna-r.1	125586846	transmembrane protein 18-like
bra-r.6	103840007	transmembrane protein 18
bra-r.6	103833600	transmembrane protein 18
ath-u.5	AT1G34350	Tmem18
ghi-r.1	107959532	transmembrane protein 18
ghi-r.1	107914043	transmembrane protein 18
cit-r.1	102629082	uncharacterized LOC102629082
gma-u.5	100820478	transmembrane protein 18
gma-u.5	100527513	uncharacterized LOC100527513
gma-u.5	100305910	uncharacterized LOC100305910
vvi-u.5	100261201	uncharacterized LOC100261201
ppo-u.5	7475812	uncharacterized LOC7475812
ppo-u.5	18104477	uncharacterized LOC18104477
mtr-u.5	25489584	transmembrane protein 18
mtr-u.5	11412323	transmembrane protein 18
sly-u.5	101253109	uncharacterized LOC101253109
sot-r.1	102581783	transmembrane protein 18
nta-r.1	107782556	uncharacterized LOC107782556
nta-r.1	107825511	uncharacterized LOC107825511
osa-u.5	4338885	uncharacterized LOC4338885
osa-u.5	4344436	uncharacterized LOC4344436
zma-u.5	100192581	Transmembrane protein 18
zma-u.5	100283849	uncharacterized LOC100283849
tae-r.2	123151248	transmembrane protein 18
tae-r.2	123168197	transmembrane protein 18
tae-r.2	123161502	transmembrane protein 18
hvu-r.1	123411051	transmembrane protein 18-like
hvu-r.1	123446514	transmembrane protein 18-like
sbi-r.1	8058508	transmembrane protein 18
sbi-r.1	8068508	transmembrane protein 18
bdi-r.1	100825840	transmembrane protein 18
bdi-r.1	100839606	transmembrane protein 18
cre-r.1	CHLRE_02g142150v5	uncharacterized protein

Top 50 coexpressed genes to 106418747 (bna-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 106418747 (bna-r.1 coexpression data)

CoexMap"106418747"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0031965 [list] [network] nuclear membrane

(20 genes)

IEA

GO MF

Protein

XP_013714960.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, nucl 3, cyto_E.R. 2, chlo 1, plas 1, extr 1, cysk 1, cysk_plas 1

(predict for XP_013714960.1)

Subcellular
localization
TargetP

other 9

(predict for XP_013714960.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106418747	bna-r.1 for 106411928	bna-r.1 for 106379342	bna-r.1 for 125586846	bra-r.6 for 103840007	bra-r.6 for 103833600	ath-u.5 for AT1G34350	ghi-r.1 for 107959532	ghi-r.1 for 107914043	cit-r.1 for 102629082	gma-u.5 for 100820478	gma-u.5 for 100527513	gma-u.5 for 100305910	vvi-u.5 for 100261201	ppo-u.5 for 7475812	ppo-u.5 for 18104477	mtr-u.5 for 25489584	mtr-u.5 for 11412323	sly-u.5 for 101253109	sot-r.1 for 102581783	nta-r.1 for 107782556	nta-r.1 for 107825511	osa-u.5 for 4338885	osa-u.5 for 4344436	zma-u.5 for 100192581	zma-u.5 for 100283849	tae-r.2 for 123151248	tae-r.2 for 123168197	tae-r.2 for 123161502	hvu-r.1 for 123411051	hvu-r.1 for 123446514	sbi-r.1 for 8058508	sbi-r.1 for 8068508	bdi-r.1 for 100825840	bdi-r.1 for 100839606	cre-r.1 for CHLRE_02g142150v5

Ortholog

Ortholog ID: 5210

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

transmembrane protein 18

transmembrane protein 18-like

transmembrane protein 18

Tmem18

transmembrane protein 18

uncharacterized LOC102629082

transmembrane protein 18

uncharacterized LOC100527513

uncharacterized LOC100305910

uncharacterized LOC100261201

uncharacterized LOC7475812

uncharacterized LOC18104477

transmembrane protein 18

uncharacterized LOC101253109

transmembrane protein 18

uncharacterized LOC107782556

uncharacterized LOC107825511

uncharacterized LOC4338885

uncharacterized LOC4344436

Transmembrane protein 18

uncharacterized LOC100283849

transmembrane protein 18

transmembrane protein 18-like

transmembrane protein 18

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03050	Proteasome	5
bna03060	Protein export	2
bna04141	Protein processing in endoplasmic reticulum	2
bna04145	Phagosome	2
bna00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03015	mRNA surveillance pathway	2
bra04136	Autophagy - other	2
bra04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	3
ath00510	N-Glycan biosynthesis	2
ath00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00010	Glycolysis / Gluconeogenesis	2
ghi00051	Fructose and mannose metabolism	2
ghi00562	Inositol phosphate metabolism	2
ghi00710	Carbon fixation by Calvin cycle	2
ghi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00010	Glycolysis / Gluconeogenesis	2
ghi00051	Fructose and mannose metabolism	2
ghi00562	Inositol phosphate metabolism	2
ghi00710	Carbon fixation by Calvin cycle	2
ghi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03060	Protein export	3
cit03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03060	Protein export	2
gma04141	Protein processing in endoplasmic reticulum	2
gma04145	Phagosome	2
gma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	4
gma00510	N-Glycan biosynthesis	3
gma00513	Various types of N-glycan biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00020	Citrate cycle (TCA cycle)	2
vvi01200	Carbon metabolism	2
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	5
ppo03010	Ribosome	4
ppo03013	Nucleocytoplasmic transport	2
ppo00510	N-Glycan biosynthesis	2
ppo00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	4
ppo04814	Motor proteins	3
ppo03060	Protein export	3
ppo04141	Protein processing in endoplasmic reticulum	3
ppo04145	Phagosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	4
mtr04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	4
mtr03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	3
sly00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	3
sot00514	Other types of O-glycan biosynthesis	2
sot00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	4
zma03060	Protein export	2
zma04145	Phagosome	2
zma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04120	Ubiquitin mediated proteolysis	4
tae03083	Polycomb repressive complex	3
tae04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00520	Amino sugar and nucleotide sugar metabolism	3
hvu01250	Biosynthesis of nucleotide sugars	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03050	Proteasome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	6
sbi03060	Protein export	3
sbi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04144	Endocytosis	5
bdi04141	Protein processing in endoplasmic reticulum	3
bdi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03050	Proteasome	6

Expression

Expression pattern

Entrez Gene ID^*

106418747

106411928

106379342

103840007

103833600

840336

107959532

107914043

102629082

100820478

100527513

100305910

100261201

7475812

18104477

25489584

11412323

101253109

102581783

107782556

107825511

4338885

4344436

100192581

100283849

123057152

123134603

123182132

123411051

123446514

8058508

8068508

100825840

100839606

5720445

The preparation time of this page was 0.6 [sec].


Species	bna	bra	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	1	2	1	3	1	2	2	1	1	2	2	2	3	2	2	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 106418747 (bna-r.1 coexpression data)

Top 50 enrichment test to 106418747 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**