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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106419335   KRR1 small subunit processome component homolog 
 ath-u.5   AT5G08420   RNA-binding KH domain-containing protein 
 gma-u.5   100816856   ribosomal RNA assembly protein mis3-like 
 gma-u.5   100783800   KRR1 small subunit processome component homolog 
 vvi-u.5   100245609   KRR1 small subunit processome component homolog 
 ppo-u.5   7462572   KRR1 small subunit processome component 
 mtr-u.5   11435195   KRR1 small subunit processome component homolog 
 sly-u.5   101259018   KRR1 small subunit processome component 
 osa-u.5   4348775   KRR1 small subunit processome component homolog 
 zma-u.5   107521945   RNA-binding KH domain-containing protein 

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Top 50 coexpressed genes to 106419335 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106419335 (bna-r.1 coexpression data)

CoexMap"106419335"


bnaLOC106419335 | Entrez gene ID : 106419335    
Species bna ath gma vvi ppo mtr sly osa zma hvu cit bra ghi sbi bdi nta tae cre sot
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0032040 [list] [network] small-subunit processome  (155 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (615 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (3852 genes)  IEA  
Protein XP_013715555.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_013715555.2)
Subcellular
localization
TargetP
other 9  (predict for XP_013715555.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106419335
ath-u.5
for
AT5G08420
gma-u.5
for
100816856
gma-u.5
for
100783800
vvi-u.5
for
100245609
ppo-u.5
for
7462572
mtr-u.5
for
11435195
sly-u.5
for
101259018
osa-u.5
for
4348775
zma-u.5
for
107521945


Ortholog ID: 7706
Species bna bna bra bra ath ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC106419335 LOC106396313 LOC103850699 LOC103847151 AT5G08420 LOC107910627 LOC107951097 LOC102616017 LOC100783800 LOC100816856 LOC100245609 LOC7462572 LOC11435195 LOC101259018 LOC102598523 LOC107791487 LOC107779317 LOC4348775 LOC107521945 LOC123070363 LOC123078815 LOC123444261 LOC8059178 LOC100845494 CHLRE_12g508200v5
Function* KRR1 small subunit processome component homolog KRR1 small subunit processome component homolog KRR1 small subunit processome component homolog KRR1 small subunit processome component homolog RNA-binding KH domain-containing protein KRR1 small subunit processome component homolog KRR1 small subunit processome component homolog KRR1 small subunit processome component homolog KRR1 small subunit processome component homolog ribosomal RNA assembly protein mis3-like KRR1 small subunit processome component homolog KRR1 small subunit processome component KRR1 small subunit processome component homolog KRR1 small subunit processome component KRR1 small subunit processome component KRR1 small subunit processome component KRR1 small subunit processome component-like KRR1 small subunit processome component homolog RNA-binding KH domain-containing protein KRR1 small subunit processome component homolog KRR1 small subunit processome component homolog KRR1 small subunit processome component homolog KRR1 small subunit processome component KRR1 small subunit processome component homolog uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 6
bra04141 Protein processing in endoplasmic reticulum 2
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 2
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 4
ghi03040 Spliceosome 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi00230 Purine metabolism 2
ghi00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 4
ghi03040 Spliceosome 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi00230 Purine metabolism 2
ghi00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 5
mtr00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 3
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 5
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00450 Selenocompound metabolism 2
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
bdi03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106419335 106396313 103850699 103847151 830741 107910627 107951097 102616017 100783800 100816856 100245609 7462572 11435195 101259018 102598523 107791487 107779317 4348775 107521945 123070363 123078815 123444261 8059178 100845494 5716516
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