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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106346606   protein BASIC PENTACYSTEINE2 
 bna-r.1   106400879   protein BASIC PENTACYSTEINE2-like 
 bna-r.1   106382321   protein BASIC PENTACYSTEINE2 
 bra-r.6   103842953   protein BASIC PENTACYSTEINE2 
 bra-r.6   103836058   protein BASIC PENTACYSTEINE2 
 bra-r.6   103872265   protein BASIC PENTACYSTEINE2 
 ath-u.5   BPC1   basic pentacysteine1 
 ath-u.5   BPC2   basic pentacysteine 2 
 ghi-r.1   121228305   protein BASIC PENTACYSTEINE1 
 ghi-r.1   107934525   protein BASIC PENTACYSTEINE2 
 ghi-r.1   107922313   protein BASIC PENTACYSTEINE2 
 cit-r.1   102616365   protein BASIC PENTACYSTEINE2-like 
 gma-u.5   GBP   GAGA-binding protein 
 gma-u.5   100814354   uncharacterized LOC100814354 
 gma-u.5   100800718   protein BASIC PENTACYSTEINE2 
 vvi-u.5   BBR/BPC2   protein BASIC PENTACYSTEINE1-like 
 vvi-u.5   100233138   GAGA-binding transcriptional activator BBR/BPC1-like 
 ppo-u.5   112323524   protein BASIC PENTACYSTEINE2 
 ppo-u.5   7471447   protein BASIC PENTACYSTEINE2 
 mtr-u.5   120575876   protein BASIC PENTACYSTEINE1 
 mtr-u.5   120577634   protein BASIC PENTACYSTEINE2 
 sly-u.5   BBR/BPC1   GAGA-binding transcriptional activator 
 sly-u.5   BBR/BPC5   GAGA-binding transcriptional activator 
 sot-r.1   BBR/BPC1   protein BASIC PENTACYSTEINE2-like 
 sot-r.1   102593241   protein BASIC PENTACYSTEINE2-like 
 nta-r.1   107800183   protein BASIC PENTACYSTEINE2-like 
 nta-r.1   107792698   protein BASIC PENTACYSTEINE2-like 
 nta-r.1   107808957   protein BASIC PENTACYSTEINE2-like 
 osa-u.5   9268674   barley B recombinant-like protein A 
 osa-u.5   4347983   barley B recombinant-like protein A 
 osa-u.5   4347984   barley B recombinant-like protein C 
 zma-u.5   100283491   uncharacterized LOC100283491 
 zma-u.5   100191172   uncharacterized LOC100191172 
 zma-u.5   100285904   uncharacterized LOC100285904 
 tae-r.2   123098124   protein Barley B recombinant 
 tae-r.2   123085222   protein Barley B recombinant 
 tae-r.2   123092837   protein Barley B recombinant 
 hvu-r.1   123449207   protein Barley B recombinant 
 sbi-r.1   8057324   protein Barley B recombinant 
 sbi-r.1   8057326   protein Barley B recombinant 
 sbi-r.1   8076161   protein Barley B recombinant 
 bdi-r.1   100846221   barley B recombinant-like protein A 
 bdi-r.1   100846523   barley B recombinant-like protein A 

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Top 50 coexpressed genes to 106346606 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106346606 (bna-r.1 coexpression data)

CoexMap"106419723"


bnaLOC106419723 | Entrez gene ID : 106419723    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 3 2 3 1 3 2 2 2 2 2 3 3 3 3 1 3 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009723 [list] [network] response to ethylene  (198 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0043565 [list] [network] sequence-specific DNA binding  (2444 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (3791 genes)  IEA  
Protein XP_013715996.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_013715996.1)
Subcellular
localization
TargetP
other 8  (predict for XP_013715996.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106346606
bna-r.1
for
106400879
bna-r.1
for
106382321
bra-r.6
for
103842953
bra-r.6
for
103836058
bra-r.6
for
103872265
ath-u.5
for
BPC1
ath-u.5
for
BPC2
ghi-r.1
for
121228305
ghi-r.1
for
107934525
ghi-r.1
for
107922313
cit-r.1
for
102616365
gma-u.5
for
GBP
gma-u.5
for
100814354
gma-u.5
for
100800718
vvi-u.5
for
BBR/BPC2
vvi-u.5
for
100233138
ppo-u.5
for
112323524
ppo-u.5
for
7471447
mtr-u.5
for
120575876
mtr-u.5
for
120577634
sly-u.5
for
BBR/BPC1
sly-u.5
for
BBR/BPC5
sot-r.1
for
BBR/BPC1
sot-r.1
for
102593241
nta-r.1
for
107800183
nta-r.1
for
107792698
nta-r.1
for
107808957
osa-u.5
for
9268674
osa-u.5
for
4347983
osa-u.5
for
4347984
zma-u.5
for
100283491
zma-u.5
for
100191172
zma-u.5
for
100285904
tae-r.2
for
123098124
tae-r.2
for
123085222
tae-r.2
for
123092837
hvu-r.1
for
123449207
sbi-r.1
for
8057324
sbi-r.1
for
8057326
sbi-r.1
for
8076161
bdi-r.1
for
100846221
bdi-r.1
for
100846523


Ortholog ID: 2254
Species bna bna bra bra bra ath ath ghi ghi ghi cit gma gma gma vvi vvi ppo ppo ppo mtr mtr sly sly sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu sbi sbi sbi bdi bdi
Symbol LOC106431061 LOC106434643 LOC103842953 LOC103836058 LOC103872265 BPC1 BPC2 LOC121228305 LOC107934525 LOC107909954 LOC102616365 GBP LOC100814354 LOC100783209 BBR/BPC2 LOC100233138 LOC7471447 LOC7459089 LOC7485186 LOC120575876 LOC120577634 BBR/BPC1 BBR/BPC5 BBR/BPC1 LOC102593241 LOC107800183 LOC107792698 LOC107817801 LOC9268674 LOC4347983 LOC4347984 LOC100283491 LOC100191172 LOC100285904 LOC123098124 LOC123085222 LOC123092837 LOC123449207 LOC8057324 LOC8057326 LOC8076161 LOC100846221 LOC100846523
Function* protein BASIC PENTACYSTEINE2-like protein BASIC PENTACYSTEINE2-like protein BASIC PENTACYSTEINE2 protein BASIC PENTACYSTEINE2 protein BASIC PENTACYSTEINE2 basic pentacysteine1 basic pentacysteine 2 protein BASIC PENTACYSTEINE1 protein BASIC PENTACYSTEINE2 protein BASIC PENTACYSTEINE2 protein BASIC PENTACYSTEINE2-like GAGA-binding protein uncharacterized LOC100814354 protein BASIC PENTACYSTEINE2 protein BASIC PENTACYSTEINE1-like GAGA-binding transcriptional activator BBR/BPC1-like protein BASIC PENTACYSTEINE2 protein BASIC PENTACYSTEINE2 protein BASIC PENTACYSTEINE2 protein BASIC PENTACYSTEINE1 protein BASIC PENTACYSTEINE2 GAGA-binding transcriptional activator GAGA-binding transcriptional activator protein BASIC PENTACYSTEINE2-like protein BASIC PENTACYSTEINE2-like protein BASIC PENTACYSTEINE2-like protein BASIC PENTACYSTEINE2-like protein BASIC PENTACYSTEINE2-like barley B recombinant-like protein A barley B recombinant-like protein A barley B recombinant-like protein C uncharacterized LOC100283491 uncharacterized LOC100191172 uncharacterized LOC100285904 protein Barley B recombinant protein Barley B recombinant protein Barley B recombinant protein Barley B recombinant protein Barley B recombinant protein Barley B recombinant protein Barley B recombinant barley B recombinant-like protein A barley B recombinant-like protein A
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04016 MAPK signaling pathway - plant 3
cit04075 Plant hormone signal transduction 3
cit03040 Spliceosome 2
cit03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 2
gma04120 Ubiquitin mediated proteolysis 2
gma04141 Protein processing in endoplasmic reticulum 2
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 4
vvi04141 Protein processing in endoplasmic reticulum 3
vvi03013 Nucleocytoplasmic transport 2
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 3
ppo03013 Nucleocytoplasmic transport 2
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04626 Plant-pathogen interaction 3
ppo04144 Endocytosis 3
ppo04016 MAPK signaling pathway - plant 2
ppo04070 Phosphatidylinositol signaling system 2
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 6
mtr04120 Ubiquitin mediated proteolysis 2
mtr03082 ATP-dependent chromatin remodeling 2
mtr03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 2
sly04136 Autophagy - other 2
sly04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 4
sot04136 Autophagy - other 4
sot04382 Cornified envelope formation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 7
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
nta03013 Nucleocytoplasmic transport 3
nta03015 mRNA surveillance pathway 3
nta00730 Thiamine metabolism 2
nta00740 Riboflavin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04814 Motor proteins 4
osa04145 Phagosome 3
osa04517 IgSF CAM signaling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00770 Pantothenate and CoA biosynthesis 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 6
tae00053 Ascorbate and aldarate metabolism 3
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae01240 Biosynthesis of cofactors 3
tae01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 4
tae00310 Lysine degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 4
tae00310 Lysine degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04517 IgSF CAM signaling 2
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106431061 106434643 103842953 103836058 103872265 814724 838031 121228305 107934525 107909954 102616365 606296 100814354 100783209 100255909 100233138 7471447 7459089 7485186 120575876 120577634 101055562 101055564 102595573 102593241 107800183 107792698 107817801 9268674 4347983 4347984 100283491 100191172 100285904 123098124 123085222 123092837 123449207 8057324 8057326 8076161 100846221 100846523
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