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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106419987   F-box protein SKIP19-like 
 ath-u.5   AT4G05460   RNI-like superfamily protein 
 ath-u.5   AT4G03635   F-box/LRR protein 
 gma-u.5   100801218   F-box protein SKIP19 
 gma-u.5   100788317   F-box protein SKIP19 
 vvi-u.5   100265193   F-box protein SKIP19 
 mtr-u.5   11445624   F-box protein SKIP19 
 mtr-u.5   11445869   putative F-box/LRR-repeat protein 23 
 sly-u.5   101244792   F-box family protein 
 osa-u.5   4344873   putative F-box/LRR-repeat protein 23 
 zma-u.5   109943001   putative F-box/LRR-repeat protein 23 
 zma-u.5   100273165   ubiquitin-protein ligase 
 zma-u.5   100284322   uncharacterized LOC100284322 

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Top 50 coexpressed genes to 106419987 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106419987 (bna-r.1 coexpression data)

CoexMap"106419987"


bnaLOC106419987 | Entrez gene ID : 106419987    
Species bna ath gma vvi mtr sly osa zma ppo hvu sot tae nta bra cit ghi bdi sbi cre
Paralog 1 2 2 1 2 1 1 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_013716276.1 [sequence] [blastp]
XP_022547315.1 [sequence] [blastp]
XP_022547317.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto_nucl 4,  cyto 1  (predict for XP_013716276.1)
nucl 6,  cyto_nucl 5,  cyto 3  (predict for XP_022547315.1)
cyto 4,  chlo 2,  nucl 2,  cyto_pero 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_022547317.1)
Subcellular
localization
TargetP
chlo 7,  other 6  (predict for XP_013716276.1)
chlo 7,  other 6  (predict for XP_022547315.1)
chlo 7,  other 6  (predict for XP_022547317.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106419987

.
ath-u.5
for
AT4G05460

.
ath-u.5
for
AT4G03635

.
gma-u.5
for
100801218

.
gma-u.5
for
100788317

.
vvi-u.5
for
100265193

.
mtr-u.5
for
11445624

.
mtr-u.5
for
11445869

.
sly-u.5
for
101244792

.
osa-u.5
for
4344873

.
zma-u.5
for
109943001

.
zma-u.5
for
100273165

.
zma-u.5
for
100284322

.


Ortholog ID: 306
Species ath gma gma sly zma zma bra vvi mtr mtr tae hvu hvu ghi bna sbi cit bdi nta nta
Symbol AT4G05460 LOC100788317 LOC100801218 LOC101254923 LOC100273165 LOC100284322 LOC103836436 LOC100265193 LOC11445869 LOC11445624 LOC123104519 LOC123426827 LOC123395628 LOC107938509 LOC106419987 LOC8085020 LOC102622722 LOC100838930 LOC107792910 LOC107770397
Function* RNI-like superfamily protein F-box protein SKIP19 F-box protein SKIP19 F-box protein SKIP19-like ubiquitin-protein ligase uncharacterized LOC100284322 putative F-box/LRR-repeat protein 23 F-box protein SKIP19 putative F-box/LRR-repeat protein 23 F-box protein SKIP19 putative F-box/LRR-repeat protein 23 putative F-box/LRR-repeat protein 23 putative F-box/LRR-repeat protein 23 F-box protein SKIP19 F-box protein SKIP19-like F-box protein SKIP19 F-box protein SKIP19-like putative F-box/LRR-repeat protein 23 putative F-box/LRR-repeat protein 9 putative F-box/LRR-repeat protein 9
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 4
sly03040 Spliceosome 3
sly03013 Nucleocytoplasmic transport 2
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00220 Arginine biosynthesis 3
bra00250 Alanine, aspartate and glutamate metabolism 3
bra00630 Glyoxylate and dicarboxylate metabolism 3
bra00910 Nitrogen metabolism 3
bra01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 3
mtr00410 beta-Alanine metabolism 2
mtr00020 Citrate cycle (TCA cycle) 2
mtr01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04146 Peroxisome 2
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 2
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 7
ghi03015 mRNA surveillance pathway 7
ghi03040 Spliceosome 7
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit00190 Oxidative phosphorylation 3
cit03420 Nucleotide excision repair 2
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825896 100788317 100801218 101254923 100273165 100284322 103836436 100265193 11445869 11445624 123104519 123426827 123395628 107938509 106419987 8085020 102622722 100838930 107792910 107770397
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