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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106421038   protein CMSS1 
 bna-r.1   106391540   protein CMSS1 
 bra-r.6   103866696   protein CMSS1 
 ath-u.5   AT2G43110   U3 containing 90S pre-ribosomal complex subunit 
 ghi-r.1   107896970   protein CMSS1 
 ghi-r.1   107914683   protein CMSS1 
 cit-r.1   102627760   uncharacterized LOC102627760 
 gma-u.5   100819855   protein CMSS1 
 vvi-u.5   100251412   uncharacterized LOC100251412 
 ppo-u.5   7462038   uncharacterized LOC7462038 
 mtr-u.5   11419595   protein CMSS1 
 sly-u.5   101254094   uncharacterized LOC101254094 
 sot-r.1   102581867   protein CMSS1-like 
 sot-r.1   102594115   protein CMSS1-like 
 nta-r.1   107797834   uncharacterized LOC107797834 
 nta-r.1   107778635   uncharacterized LOC107778635 
 osa-u.5   4335541   uncharacterized LOC4335541 
 zma-u.5   100279147   DEAD-box helicase family protein 
 tae-r.2   123188995   uncharacterized protein C3orf26 homolog 
 tae-r.2   123053087   protein CMSS1 
 tae-r.2   123045252   protein CMSS1 
 hvu-r.1   123426470   uncharacterized protein C3orf26 homolog 
 sbi-r.1   8069453   protein CMSS1 
 bdi-r.1   100844428   uncharacterized protein C3orf26 homolog 

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Top 50 coexpressed genes to 106421038 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106421038 (bna-r.1 coexpression data)

CoexMap"106421038"


bnaLOC106421038 | Entrez gene ID : 106421038    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 2 1 1 1 1 1 1 2 2 1 1 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0030686 [list] [network] 90S preribosome  (123 genes)  IEA  
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
Protein XP_013717346.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_013717346.1)
Subcellular
localization
TargetP
chlo 8,  other 5  (predict for XP_013717346.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106421038
bna-r.1
for
106391540
bra-r.6
for
103866696
ath-u.5
for
AT2G43110
ghi-r.1
for
107896970
ghi-r.1
for
107914683
cit-r.1
for
102627760
gma-u.5
for
100819855
vvi-u.5
for
100251412
ppo-u.5
for
7462038
mtr-u.5
for
11419595
sly-u.5
for
101254094
sot-r.1
for
102581867
sot-r.1
for
102594115
nta-r.1
for
107797834
nta-r.1
for
107778635
osa-u.5
for
4335541
zma-u.5
for
100279147
tae-r.2
for
123188995
tae-r.2
for
123053087
tae-r.2
for
123045252
hvu-r.1
for
123426470
sbi-r.1
for
8069453
bdi-r.1
for
100844428


Ortholog ID: 10718
Species bna bna bra ath ghi ghi cit gma vvi ppo mtr sly sot sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC106421038 LOC106391540 LOC103866696 AT2G43110 LOC107896970 LOC107914683 LOC102627760 LOC100819855 LOC100251412 LOC7462038 LOC11419595 LOC101254094 LOC102581867 LOC102594115 LOC107797834 LOC107778635 LOC4335541 LOC100279147 LOC123188995 LOC123053087 LOC123045252 LOC123426470 LOC8069453 LOC100844428
Function* protein CMSS1 protein CMSS1 protein CMSS1 U3 containing 90S pre-ribosomal complex subunit protein CMSS1 protein CMSS1 uncharacterized LOC102627760 protein CMSS1 uncharacterized LOC100251412 uncharacterized LOC7462038 protein CMSS1 uncharacterized LOC101254094 protein CMSS1-like protein CMSS1-like uncharacterized LOC107797834 uncharacterized LOC107778635 uncharacterized LOC4335541 DEAD-box helicase family protein uncharacterized protein C3orf26 homolog protein CMSS1 protein CMSS1 uncharacterized protein C3orf26 homolog protein CMSS1 uncharacterized protein C3orf26 homolog
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
ath03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 7
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 3
nta00190 Oxidative phosphorylation 2
nta00195 Photosynthesis 2
nta04120 Ubiquitin mediated proteolysis 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
nta04120 Ubiquitin mediated proteolysis 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 6
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 3
sbi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 7
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106421038 106391540 103866696 818913 107896970 107914683 102627760 100819855 100251412 7462038 11419595 101254094 102581867 102594115 107797834 107778635 4335541 100279147 123188995 123053087 123045252 123426470 8069453 100844428
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