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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106422148   CST complex subunit CTC1 
 bna-r.1   106360966   CST complex subunit CTC1 
 bra-r.6   103838843   CST complex subunit CTC1 
 ath-u.5   CTC1   conserved telomere maintenance component 1 
 ghi-r.1   107907339   CST complex subunit CTC1 
 ghi-r.1   107907274   CST complex subunit CTC1 
 cit-r.1   102626180   CST complex subunit CTC1 
 gma-u.5   100816348   CST complex subunit CTC1 
 vvi-u.5   100242069   CST complex subunit CTC1 
 ppo-u.5   7462901   CST complex subunit CTC1 
 mtr-u.5   120577676   CST complex subunit CTC1 
 sly-u.5   101257187   CST complex subunit CTC1-like 
 sly-u.5   101249620   CST complex subunit CTC1-like 
 sot-r.1   102601984   CST complex subunit CTC1 
 nta-r.1   107809046   CST complex subunit CTC1 
 nta-r.1   107792111   CST complex subunit CTC1 
 osa-u.5   4346913   CST complex subunit CTC1 
 zma-u.5   100304248   uncharacterized LOC100304248 
 tae-r.2   123103631   CST complex subunit CTC1 
 tae-r.2   123111841   CST complex subunit CTC1 
 sbi-r.1   8065386   CST complex subunit CTC1 
 bdi-r.1   100833920   CST complex subunit CTC1 

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Top 50 coexpressed genes to 106422148 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106422148 (bna-r.1 coexpression data)

CoexMap"106422148"


bnaLOC106422148 | Entrez gene ID : 106422148    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae sbi bdi cre hvu
Paralog 2 1 1 2 1 1 1 1 1 2 1 2 1 1 2 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045740 [list] [network] positive regulation of DNA replication  (2 genes)  IEA  
GO:0010833 [list] [network] telomere maintenance via telomere lengthening  (131 genes)  IEA  
GO CC
GO:1990879 [list] [network] CST complex  (4 genes)  IEA  
GO MF
GO:0042162 [list] [network] telomeric DNA binding  (176 genes)  IEA  
GO:0003697 [list] [network] single-stranded DNA binding  (274 genes)  IEA  
Protein XP_013718428.1 [sequence] [blastp]
XP_013718430.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 2,  cyto 2,  cyto_nucl 2,  chlo 1,  plas 1,  vacu 1,  E.R. 1,  E.R._vacu 1,  E.R._plas 1  (predict for XP_013718428.1)
cyto 3,  nucl 2,  E.R. 2,  chlo 1,  nucl_plas 1,  E.R._vacu 1,  cyto_pero 1,  E.R._plas 1  (predict for XP_013718430.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_013718428.1)
chlo 8  (predict for XP_013718430.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106422148
bna-r.1
for
106360966
bra-r.6
for
103838843
ath-u.5
for
CTC1
ghi-r.1
for
107907339
ghi-r.1
for
107907274
cit-r.1
for
102626180
gma-u.5
for
100816348
vvi-u.5
for
100242069
ppo-u.5
for
7462901
mtr-u.5
for
120577676
sly-u.5
for
101257187
sly-u.5
for
101249620
sot-r.1
for
102601984
nta-r.1
for
107809046
nta-r.1
for
107792111
osa-u.5
for
4346913
zma-u.5
for
100304248
tae-r.2
for
123103631
tae-r.2
for
123111841
sbi-r.1
for
8065386
bdi-r.1
for
100833920


Ortholog ID: 10848
Species bna bna bra ath ghi ghi cit gma vvi ppo mtr sly sly sot nta nta osa zma tae tae sbi bdi
Symbol LOC106422148 LOC106360966 LOC103838843 CTC1 LOC107907339 LOC107907274 LOC102626180 LOC100816348 LOC100242069 LOC7462901 LOC120577676 LOC101257187 LOC101249620 LOC102601984 LOC107809046 LOC107792111 LOC4346913 LOC100304248 LOC123103631 LOC123111841 LOC8065386 LOC100833920
Function* CST complex subunit CTC1 CST complex subunit CTC1 CST complex subunit CTC1 conserved telomere maintenance component 1 CST complex subunit CTC1 CST complex subunit CTC1 CST complex subunit CTC1 CST complex subunit CTC1 CST complex subunit CTC1 CST complex subunit CTC1 CST complex subunit CTC1 CST complex subunit CTC1-like CST complex subunit CTC1-like CST complex subunit CTC1 CST complex subunit CTC1 CST complex subunit CTC1 CST complex subunit CTC1 uncharacterized LOC100304248 CST complex subunit CTC1 CST complex subunit CTC1 CST complex subunit CTC1 CST complex subunit CTC1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 2
bna03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 2
bna03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03450 Non-homologous end-joining 3
ghi03022 Basal transcription factors 2
ghi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03450 Non-homologous end-joining 3
ghi03022 Basal transcription factors 2
ghi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
gma00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 7
vvi03410 Base excision repair 2
vvi03420 Nucleotide excision repair 2
vvi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03440 Homologous recombination 2
ppo03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 4
mtr03460 Fanconi anemia pathway 3
mtr04120 Ubiquitin mediated proteolysis 2
mtr03440 Homologous recombination 2
mtr00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 2
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 2
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
nta04145 Phagosome 2
nta04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03430 Mismatch repair 3
tae04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 3
tae04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
bdi03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106422148 106360966 103838843 826554 107907339 107907274 102626180 100816348 100242069 7462901 120577676 101257187 101249620 102601984 107809046 107792111 4346913 100304248 123103631 123111841 8065386 100833920
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