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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106424910   increased DNA methylation 3 
 ath-u.5   AT1G20870   HSP20-like chaperones superfamily protein 
 ath-u.5   AT1G76440   HSP20-like chaperones superfamily protein 
 gma-u.5   100786407   increased DNA methylation 3 
 gma-u.5   100804780   alpha-crystallin domain-containing protein 
 vvi-u.5   100246177   increased DNA methylation 3 
 ppo-u.5   7485692   increased DNA methylation 3 
 mtr-u.5   11407285   increased DNA methylation 3 
 mtr-u.5   11429222   increased DNA methylation 3 
 sly-u.5   101267233   increased DNA methylation 3-like 
 sly-u.5   101266717   increased DNA methylation 3 

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Top 50 coexpressed genes to 106424910 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106424910 (bna-r.1 coexpression data)

CoexMap"106424910"


bnaLOC106424910 | Entrez gene ID : 106424910    
Species bna ath gma vvi ppo mtr sly cre ghi cit hvu bdi sot bra sbi tae nta zma osa
Paralog 1 2 2 1 1 2 2 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
Protein XP_013721112.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  extr 1,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_013721112.1)
Subcellular
localization
TargetP
other 8  (predict for XP_013721112.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106424910

.
ath-u.5
for
AT1G20870

.
ath-u.5
for
AT1G76440

.
gma-u.5
for
100786407

.
gma-u.5
for
100804780

.
vvi-u.5
for
100246177

.
ppo-u.5
for
7485692

.
mtr-u.5
for
11407285

.
mtr-u.5
for
11429222

.
sly-u.5
for
101267233

.
sly-u.5
for
101266717

.


Ortholog ID: 7419
Species ath ath gma gma sly sly bra bra vvi ppo mtr mtr ghi ghi bna sot sot cit cit nta
Symbol AT1G20870 AT1G76440 LOC100804780 LOC100786407 LOC101266717 LOC101267233 LOC103832106 LOC103830611 LOC100246177 LOC7485692 LOC11429222 LOC11407285 LOC107918229 LOC107920894 LOC106421571 LOC102582147 LOC102581493 LOC127902479 LOC102607717 LOC107786348
Function* HSP20-like chaperones superfamily protein HSP20-like chaperones superfamily protein alpha-crystallin domain-containing protein increased DNA methylation 3 increased DNA methylation 3 increased DNA methylation 3-like increased DNA methylation 3 increased DNA methylation 3 increased DNA methylation 3 increased DNA methylation 3 increased DNA methylation 3 increased DNA methylation 3 increased DNA methylation 3 increased DNA methylation 3 increased DNA methylation 3 increased DNA methylation 3-like increased DNA methylation 3 increased DNA methylation 3 increased DNA methylation 3 increased DNA methylation 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 4
sly00630 Glyoxylate and dicarboxylate metabolism 3
sly00710 Carbon fixation by Calvin cycle 3
sly00260 Glycine, serine and threonine metabolism 2
sly00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
bra03082 ATP-dependent chromatin remodeling 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 5
bra03013 Nucleocytoplasmic transport 3
bra03010 Ribosome 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
ppo04075 Plant hormone signal transduction 2
ppo03083 Polycomb repressive complex 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 5
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 3
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 3
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 3
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 2
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
sot03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
nta00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
nta00564 Glycerophospholipid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 838680 843977 100804780 100786407 101266717 101267233 103832106 103830611 100246177 7485692 11429222 11407285 107918229 107920894 106421571 102582147 102581493 127902479 102607717 107786348
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