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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106425366   RGG repeats nuclear RNA binding protein A-like 
 bna-r.1   106401227   RGG repeats nuclear RNA binding protein B-like 
 bna-r.1   106400693   RGG repeats nuclear RNA binding protein C 
 bna-r.1   106381869   RGG repeats nuclear RNA binding protein C 
 bra-r.6   103839539   RGG repeats nuclear RNA binding protein C 
 bra-r.6   103827661   RGG repeats nuclear RNA binding protein C 
 bra-r.6   103869063   RGG repeats nuclear RNA binding protein A 
 ath-u.5   AT4G16830   Hyaluronan / mRNA binding family 
 ath-u.5   AT4G17520   Hyaluronan / mRNA binding family 
 ath-u.5   AT5G47210   Hyaluronan / mRNA binding family 
 ghi-r.1   107899894   RGG repeats nuclear RNA binding protein A 
 ghi-r.1   107900808   RGG repeats nuclear RNA binding protein A 
 ghi-r.1   107929374   RGG repeats nuclear RNA binding protein A 
 cit-r.1   102609479   RGG repeats nuclear RNA binding protein A 
 gma-u.5   100805110   RGG repeats nuclear RNA binding protein A 
 gma-u.5   100807657   uncharacterized LOC100807657 
 gma-u.5   100814825   RGG repeats nuclear RNA binding protein A 
 vvi-u.5   100265608   RGG repeats nuclear RNA binding protein A 
 vvi-u.5   100259885   RGG repeats nuclear RNA binding protein A 
 ppo-u.5   18094574   RGG repeats nuclear RNA binding protein A 
 ppo-u.5   18105076   RGG repeats nuclear RNA binding protein A 
 ppo-u.5   7461996   RGG repeats nuclear RNA binding protein A 
 mtr-u.5   11438402   RGG repeats nuclear RNA binding protein A 
 mtr-u.5   25500060   RGG repeats nuclear RNA binding protein A 
 sly-u.5   101255921   plasminogen activator inhibitor 1 RNA-binding protein-like 
 sly-u.5   101256310   RGG repeats nuclear RNA binding protein A 
 sly-u.5   101260416   RGG repeats nuclear RNA binding protein A-like 
 sot-r.1   RGGA   nuclear RNA binding protein 
 sot-r.1   102590612   plasminogen activator inhibitor 1 RNA-binding protein-like 
 sot-r.1   102590961   plasminogen activator inhibitor 1 RNA-binding protein-like 
 nta-r.1   107815016   RGG repeats nuclear RNA binding protein A-like 
 nta-r.1   107823283   RGG repeats nuclear RNA binding protein A-like 
 nta-r.1   107801022   RGG repeats nuclear RNA binding protein A-like 
 osa-u.5   4339782   RGG repeats nuclear RNA binding protein A 
 osa-u.5   4339423   RGG repeats nuclear RNA binding protein A 
 osa-u.5   4324661   RGG repeats nuclear RNA binding protein A 
 zma-u.5   103651256   RGG repeats nuclear RNA binding protein C 
 zma-u.5   100282553   RGG repeats nuclear RNA binding protein 
 zma-u.5   100282188   RGG repeats nuclear RNA binding protein 
 tae-r.2   123070458   RGG repeats nuclear RNA binding protein A 
 tae-r.2   123062033   RGG repeats nuclear RNA binding protein A 
 hvu-r.1   123448634   RGG repeats nuclear RNA binding protein A-like 
 hvu-r.1   123452521   RGG repeats nuclear RNA binding protein A-like 
 hvu-r.1   123444307   RGG repeats nuclear RNA binding protein A-like 
 sbi-r.1   8068975   RGG repeats nuclear RNA binding protein A 
 sbi-r.1   8082208   RGG repeats nuclear RNA binding protein A 
 sbi-r.1   8059196   RGG repeats nuclear RNA binding protein C 
 bdi-r.1   104582803   RGG repeats nuclear RNA binding protein A 
 bdi-r.1   100843766   RGG repeats nuclear RNA binding protein A 
 bdi-r.1   100837480   RGG repeats nuclear RNA binding protein A 
 cre-r.1   CHLRE_09g393358v5   uncharacterized protein 

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Top 50 coexpressed genes to 106425366 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106425366 (bna-r.1 coexpression data)

CoexMap"106425366"


bnaLOC106425366 | Entrez gene ID : 106425366    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 3 3 1 3 2 3 2 3 3 3 3 3 2 3 3 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (16489 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (3852 genes)  IEA  
Protein XP_048623484.1 [sequence] [blastp]
XP_048623511.1 [sequence] [blastp]
XP_048623524.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  chlo 1,  mito 1,  chlo_mito 1  (predict for XP_048623484.1)
nucl 9,  chlo 1,  mito 1,  chlo_mito 1  (predict for XP_048623511.1)
nucl 8,  mito 1  (predict for XP_048623524.1)
Subcellular
localization
TargetP
other 7,  chlo 5  (predict for XP_048623484.1)
other 7,  chlo 5  (predict for XP_048623511.1)
other 7,  chlo 5  (predict for XP_048623524.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106425366
bna-r.1
for
106401227
bna-r.1
for
106400693
bna-r.1
for
106381869
bra-r.6
for
103839539
bra-r.6
for
103827661
bra-r.6
for
103869063
ath-u.5
for
AT4G16830
ath-u.5
for
AT4G17520
ath-u.5
for
AT5G47210
ghi-r.1
for
107899894
ghi-r.1
for
107900808
ghi-r.1
for
107929374
cit-r.1
for
102609479
gma-u.5
for
100805110
gma-u.5
for
100807657
gma-u.5
for
100814825
vvi-u.5
for
100265608
vvi-u.5
for
100259885
ppo-u.5
for
18094574
ppo-u.5
for
18105076
ppo-u.5
for
7461996
mtr-u.5
for
11438402
mtr-u.5
for
25500060
sly-u.5
for
101255921
sly-u.5
for
101256310
sly-u.5
for
101260416
sot-r.1
for
RGGA
sot-r.1
for
102590612
sot-r.1
for
102590961
nta-r.1
for
107815016
nta-r.1
for
107823283
nta-r.1
for
107801022
osa-u.5
for
4339782
osa-u.5
for
4339423
osa-u.5
for
4324661
zma-u.5
for
103651256
zma-u.5
for
100282553
zma-u.5
for
100282188
tae-r.2
for
123070458
tae-r.2
for
123062033
hvu-r.1
for
123448634
hvu-r.1
for
123452521
hvu-r.1
for
123444307
sbi-r.1
for
8068975
sbi-r.1
for
8082208
sbi-r.1
for
8059196
bdi-r.1
for
104582803
bdi-r.1
for
100843766
bdi-r.1
for
100837480
cre-r.1
for
CHLRE_09g393358v5


Ortholog ID: 995
Species bna bna bna bra bra ath ath ath ghi ghi ghi cit gma gma gma vvi vvi ppo ppo ppo mtr mtr sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi cre
Symbol LOC106425366 LOC125593883 LOC106400793 LOC103839539 LOC103855456 AT4G16830 AT4G17520 AT5G47210 LOC107929374 LOC107929674 LOC107929675 LOC102609479 LOC100807657 LOC100816645 LOC100791259 LOC100265608 LOC100259885 LOC18094574 LOC7461996 LOC7453918 LOC11438402 LOC25500060 LOC101255921 LOC101256310 LOC101260416 RGGA LOC102590612 LOC102590961 LOC107793183 LOC107782412 LOC107813680 LOC4339782 LOC4339423 LOC4324661 LOC103651256 LOC100282188 LOC103631509 LOC123062033 LOC123064581 LOC123149335 LOC123448634 LOC123452521 LOC123444307 LOC8068975 LOC8082208 LOC8059196 LOC104582803 LOC100837480 LOC100831128 CHLRE_09g393358v5
Function* RGG repeats nuclear RNA binding protein A-like RGG repeats nuclear RNA binding protein A-like RGG repeats nuclear RNA binding protein C-like RGG repeats nuclear RNA binding protein C RGG repeats nuclear RNA binding protein B Hyaluronan / mRNA binding family Hyaluronan / mRNA binding family Hyaluronan / mRNA binding family RGG repeats nuclear RNA binding protein A RGG repeats nuclear RNA binding protein A RGG repeats nuclear RNA binding protein A RGG repeats nuclear RNA binding protein A uncharacterized LOC100807657 RGG repeats nuclear RNA binding protein A RGG repeats nuclear RNA binding protein A RGG repeats nuclear RNA binding protein A RGG repeats nuclear RNA binding protein A RGG repeats nuclear RNA binding protein A RGG repeats nuclear RNA binding protein A RGG repeats nuclear RNA binding protein A RGG repeats nuclear RNA binding protein A RGG repeats nuclear RNA binding protein A plasminogen activator inhibitor 1 RNA-binding protein-like RGG repeats nuclear RNA binding protein A RGG repeats nuclear RNA binding protein A-like nuclear RNA binding protein plasminogen activator inhibitor 1 RNA-binding protein-like plasminogen activator inhibitor 1 RNA-binding protein-like RGG repeats nuclear RNA binding protein A-like plasminogen activator inhibitor 1 RNA-binding protein-like RGG repeats nuclear RNA binding protein A-like RGG repeats nuclear RNA binding protein A RGG repeats nuclear RNA binding protein A RGG repeats nuclear RNA binding protein A RGG repeats nuclear RNA binding protein C RGG repeats nuclear RNA binding protein RGG repeats nuclear RNA binding protein A RGG repeats nuclear RNA binding protein A RGG repeats nuclear RNA binding protein A RGG repeats nuclear RNA binding protein A RGG repeats nuclear RNA binding protein A-like RGG repeats nuclear RNA binding protein A-like RGG repeats nuclear RNA binding protein A-like RGG repeats nuclear RNA binding protein A RGG repeats nuclear RNA binding protein A RGG repeats nuclear RNA binding protein C RGG repeats nuclear RNA binding protein A RGG repeats nuclear RNA binding protein A RGG repeats nuclear RNA binding protein A uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 18
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 7
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 11
ath03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 10
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 5
gma03040 Spliceosome 4
gma03013 Nucleocytoplasmic transport 3
gma03015 mRNA surveillance pathway 3
gma00220 Arginine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
gma01240 Biosynthesis of cofactors 2
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 11
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 5
vvi03010 Ribosome 2
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 6
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
ppo00970 Aminoacyl-tRNA biosynthesis 2
ppo03040 Spliceosome 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 10
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 8
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
sot03040 Spliceosome 2
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 4
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
tae04141 Protein processing in endoplasmic reticulum 2
tae00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 3
hvu03040 Spliceosome 2
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 7
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 4
hvu03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 12
sbi04120 Ubiquitin mediated proteolysis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
sbi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106425366 125593883 106400793 103839539 103855456 827389 827467 834767 107929374 107929674 107929675 102609479 100807657 100816645 100791259 100265608 100259885 18094574 7461996 7453918 11438402 25500060 101255921 101256310 101260416 102577886 102590612 102590961 107793183 107782412 107813680 4339782 4339423 4324661 103651256 100282188 103631509 123062033 123064581 123149335 123448634 123452521 123444307 8068975 8082208 8059196 104582803 100837480 100831128 5720271
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