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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106428317   protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 
 bna-r.1   106445031   protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 
 bra-r.6   103866553   protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 
 ath-u.5   EXT-like   hydroxyproline-rich glycoprotein family protein 
 ghi-r.1   107903478   protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 
 ghi-r.1   107932776   protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 
 ghi-r.1   107920911   protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 
 cit-r.1   102609750   protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 
 gma-u.5   100806599   protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 
 gma-u.5   100783739   protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 
 vvi-u.5   100253708   protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 
 ppo-u.5   7495316   protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 
 mtr-u.5   11432014   protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 
 sly-u.5   101264233   lyst-Interacting Protein5-like protein 
 sot-r.1   102599038   protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 
 nta-r.1   107786748   protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 
 nta-r.1   107776769   protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 
 nta-r.1   107761524   protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 
 osa-u.5   4340850   protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 
 zma-u.5   103638323   protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 
 zma-u.5   100276474   uncharacterized LOC100276474 
 tae-r.2   123171573   protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 
 tae-r.2   123162070   protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 
 tae-r.2   123150513   protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 
 hvu-r.1   123407886   protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 
 sbi-r.1   8078238   protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 
 bdi-r.1   100841818   protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 
 cre-r.1   CHLRE_03g145227v5   uncharacterized protein 

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Top 50 coexpressed genes to 106428317 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106428317 (bna-r.1 coexpression data)

CoexMap"106429477"


bnaLOC106429477 | Entrez gene ID : 106429477    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 3 1 2 1 1 1 1 1 3 1 2 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0032511 [list] [network] late endosome to vacuole transport via multivesicular body sorting pathway  (97 genes)  IEA  
GO CC
GO:0005771 [list] [network] multivesicular body  (58 genes)  IEA  
GO MF
Protein XP_013725678.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  plas 1,  extr 1  (predict for XP_013725678.1)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for XP_013725678.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106428317
bna-r.1
for
106445031
bra-r.6
for
103866553
ath-u.5
for
EXT-like
ghi-r.1
for
107903478
ghi-r.1
for
107932776
ghi-r.1
for
107920911
cit-r.1
for
102609750
gma-u.5
for
100806599
gma-u.5
for
100783739
vvi-u.5
for
100253708
ppo-u.5
for
7495316
mtr-u.5
for
11432014
sly-u.5
for
101264233
sot-r.1
for
102599038
nta-r.1
for
107786748
nta-r.1
for
107776769
nta-r.1
for
107761524
osa-u.5
for
4340850
zma-u.5
for
103638323
zma-u.5
for
100276474
tae-r.2
for
123171573
tae-r.2
for
123162070
tae-r.2
for
123150513
hvu-r.1
for
123407886
sbi-r.1
for
8078238
bdi-r.1
for
100841818
cre-r.1
for
CHLRE_03g145227v5


Ortholog ID: 7293
Species bna bna bra ath ghi ghi ghi cit gma gma vvi ppo mtr sly sot nta nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC106428317 LOC106445031 LOC103866553 EXT-like LOC107932776 LOC107920911 LOC107916632 LOC102609750 LOC100806599 LOC100783739 LOC100253708 LOC7495316 LOC11432014 LOC101264233 LOC102599038 LOC107776769 LOC107761524 LOC107766345 LOC4340850 LOC103638323 LOC100276474 LOC123171573 LOC123162070 LOC123150513 LOC123407886 LOC8078238 LOC100841818 CHLRE_03g145227v5
Function* protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 hydroxyproline-rich glycoprotein family protein protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 lyst-Interacting Protein5-like protein protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 uncharacterized LOC100276474 protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 5
bna04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 5
bna04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 4
bra04141 Protein processing in endoplasmic reticulum 4
bra03250 Viral life cycle - HIV-1 2
bra03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 4
ath03250 Viral life cycle - HIV-1 2
ath03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
ghi03018 RNA degradation 2
ghi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
cit03040 Spliceosome 2
cit03018 RNA degradation 2
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 3
ppo04144 Endocytosis 2
ppo03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 3
sot00940 Phenylpropanoid biosynthesis 2
sot03250 Viral life cycle - HIV-1 2
sot03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
nta04016 MAPK signaling pathway - plant 2
nta04075 Plant hormone signal transduction 2
nta04626 Plant-pathogen interaction 2
nta00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 3
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta03083 Polycomb repressive complex 2
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 4
zma04141 Protein processing in endoplasmic reticulum 2
zma03250 Viral life cycle - HIV-1 2
zma03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 3
hvu04141 Protein processing in endoplasmic reticulum 3
hvu03250 Viral life cycle - HIV-1 2
hvu03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 6
cre03250 Viral life cycle - HIV-1 2
cre03272 Virion - Hepatitis viruses 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106428317 106445031 103866553 828782 107932776 107920911 107916632 102609750 100806599 100783739 100253708 7495316 11432014 101264233 102599038 107776769 107761524 107766345 4340850 103638323 100276474 123171573 123162070 123150513 123407886 8078238 100841818 5721273
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